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Characterization of the complete mitochondrial genome of Notospermus geniculatus

In this study, the complete mitochondrial genome of Notospermus geniculatus, was recovered through Illumina sequencing data. This complete mitochondrial genome of N. geniculatus is 15,180 bp in length and has a base composition of A (14.4%), T (41.3%), C (14.6%), G (29.6%), demonstrating a bias of h...

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Autores principales: Jiang, Jin-qing, Deng, Rui-guang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800901/
https://www.ncbi.nlm.nih.gov/pubmed/33474446
http://dx.doi.org/10.1080/23802359.2018.1522976
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author Jiang, Jin-qing
Deng, Rui-guang
author_facet Jiang, Jin-qing
Deng, Rui-guang
author_sort Jiang, Jin-qing
collection PubMed
description In this study, the complete mitochondrial genome of Notospermus geniculatus, was recovered through Illumina sequencing data. This complete mitochondrial genome of N. geniculatus is 15,180 bp in length and has a base composition of A (14.4%), T (41.3%), C (14.6%), G (29.6%), demonstrating a bias of higher AT content (55.7%) than GC content (44.2%). The mitochondrial genome contains a typically conserved structure among Lineidae mitogenomes, encoding 13 protein-coding genes (PCGs), 23 transfer RNA genes (tRNA), 2 ribosomal RNA genes (12S rRNA and 16S rRNA), and a control region (D-loop region). All PCGs were located on the H-strand. ND4L gene and ND4 gene were overlapped by 6 bp. The whole mt genome of N. geniculatus and other Protostomia mitogenomes (17 species, in total) were used for phylogenetic analysis. The result indicated N. geniculatus has the closest relationship with Lineus viridis (FJ839919.1) and clustered within Heteronemertea Clade, which representing a distinct order.
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spelling pubmed-78009012021-01-19 Characterization of the complete mitochondrial genome of Notospermus geniculatus Jiang, Jin-qing Deng, Rui-guang Mitochondrial DNA B Resour Mitogenome Announcement In this study, the complete mitochondrial genome of Notospermus geniculatus, was recovered through Illumina sequencing data. This complete mitochondrial genome of N. geniculatus is 15,180 bp in length and has a base composition of A (14.4%), T (41.3%), C (14.6%), G (29.6%), demonstrating a bias of higher AT content (55.7%) than GC content (44.2%). The mitochondrial genome contains a typically conserved structure among Lineidae mitogenomes, encoding 13 protein-coding genes (PCGs), 23 transfer RNA genes (tRNA), 2 ribosomal RNA genes (12S rRNA and 16S rRNA), and a control region (D-loop region). All PCGs were located on the H-strand. ND4L gene and ND4 gene were overlapped by 6 bp. The whole mt genome of N. geniculatus and other Protostomia mitogenomes (17 species, in total) were used for phylogenetic analysis. The result indicated N. geniculatus has the closest relationship with Lineus viridis (FJ839919.1) and clustered within Heteronemertea Clade, which representing a distinct order. Taylor & Francis 2018-10-03 /pmc/articles/PMC7800901/ /pubmed/33474446 http://dx.doi.org/10.1080/23802359.2018.1522976 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Jiang, Jin-qing
Deng, Rui-guang
Characterization of the complete mitochondrial genome of Notospermus geniculatus
title Characterization of the complete mitochondrial genome of Notospermus geniculatus
title_full Characterization of the complete mitochondrial genome of Notospermus geniculatus
title_fullStr Characterization of the complete mitochondrial genome of Notospermus geniculatus
title_full_unstemmed Characterization of the complete mitochondrial genome of Notospermus geniculatus
title_short Characterization of the complete mitochondrial genome of Notospermus geniculatus
title_sort characterization of the complete mitochondrial genome of notospermus geniculatus
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800901/
https://www.ncbi.nlm.nih.gov/pubmed/33474446
http://dx.doi.org/10.1080/23802359.2018.1522976
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