Cargando…
Characterization of the complete mitochondrial genome of Notospermus geniculatus
In this study, the complete mitochondrial genome of Notospermus geniculatus, was recovered through Illumina sequencing data. This complete mitochondrial genome of N. geniculatus is 15,180 bp in length and has a base composition of A (14.4%), T (41.3%), C (14.6%), G (29.6%), demonstrating a bias of h...
Autores principales: | , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800901/ https://www.ncbi.nlm.nih.gov/pubmed/33474446 http://dx.doi.org/10.1080/23802359.2018.1522976 |
_version_ | 1783635456766771200 |
---|---|
author | Jiang, Jin-qing Deng, Rui-guang |
author_facet | Jiang, Jin-qing Deng, Rui-guang |
author_sort | Jiang, Jin-qing |
collection | PubMed |
description | In this study, the complete mitochondrial genome of Notospermus geniculatus, was recovered through Illumina sequencing data. This complete mitochondrial genome of N. geniculatus is 15,180 bp in length and has a base composition of A (14.4%), T (41.3%), C (14.6%), G (29.6%), demonstrating a bias of higher AT content (55.7%) than GC content (44.2%). The mitochondrial genome contains a typically conserved structure among Lineidae mitogenomes, encoding 13 protein-coding genes (PCGs), 23 transfer RNA genes (tRNA), 2 ribosomal RNA genes (12S rRNA and 16S rRNA), and a control region (D-loop region). All PCGs were located on the H-strand. ND4L gene and ND4 gene were overlapped by 6 bp. The whole mt genome of N. geniculatus and other Protostomia mitogenomes (17 species, in total) were used for phylogenetic analysis. The result indicated N. geniculatus has the closest relationship with Lineus viridis (FJ839919.1) and clustered within Heteronemertea Clade, which representing a distinct order. |
format | Online Article Text |
id | pubmed-7800901 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78009012021-01-19 Characterization of the complete mitochondrial genome of Notospermus geniculatus Jiang, Jin-qing Deng, Rui-guang Mitochondrial DNA B Resour Mitogenome Announcement In this study, the complete mitochondrial genome of Notospermus geniculatus, was recovered through Illumina sequencing data. This complete mitochondrial genome of N. geniculatus is 15,180 bp in length and has a base composition of A (14.4%), T (41.3%), C (14.6%), G (29.6%), demonstrating a bias of higher AT content (55.7%) than GC content (44.2%). The mitochondrial genome contains a typically conserved structure among Lineidae mitogenomes, encoding 13 protein-coding genes (PCGs), 23 transfer RNA genes (tRNA), 2 ribosomal RNA genes (12S rRNA and 16S rRNA), and a control region (D-loop region). All PCGs were located on the H-strand. ND4L gene and ND4 gene were overlapped by 6 bp. The whole mt genome of N. geniculatus and other Protostomia mitogenomes (17 species, in total) were used for phylogenetic analysis. The result indicated N. geniculatus has the closest relationship with Lineus viridis (FJ839919.1) and clustered within Heteronemertea Clade, which representing a distinct order. Taylor & Francis 2018-10-03 /pmc/articles/PMC7800901/ /pubmed/33474446 http://dx.doi.org/10.1080/23802359.2018.1522976 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Jiang, Jin-qing Deng, Rui-guang Characterization of the complete mitochondrial genome of Notospermus geniculatus |
title | Characterization of the complete mitochondrial genome of Notospermus geniculatus |
title_full | Characterization of the complete mitochondrial genome of Notospermus geniculatus |
title_fullStr | Characterization of the complete mitochondrial genome of Notospermus geniculatus |
title_full_unstemmed | Characterization of the complete mitochondrial genome of Notospermus geniculatus |
title_short | Characterization of the complete mitochondrial genome of Notospermus geniculatus |
title_sort | characterization of the complete mitochondrial genome of notospermus geniculatus |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800901/ https://www.ncbi.nlm.nih.gov/pubmed/33474446 http://dx.doi.org/10.1080/23802359.2018.1522976 |
work_keys_str_mv | AT jiangjinqing characterizationofthecompletemitochondrialgenomeofnotospermusgeniculatus AT dengruiguang characterizationofthecompletemitochondrialgenomeofnotospermusgeniculatus |