The complete mitochondrial genome of Eastern paradise fish (Polynemus dubius)

Eastern paradise fish, Polynemus dubius (also called P. longipectoralis), lives in rivers of the Southeastern Asia. Although its whole genome is not available, we first obtained its complete mitochondrial genome through next-generation sequencing. The length of its mitochondrial genome is 16 568 bp...

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Detalles Bibliográficos
Autores principales: Li, Jia, Yu, Hui, Ruan, Zhiqiang, Ma, Xingyu, Zhang, Jimin, Wang, Min, Shi, Qiong, Bian, Chao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2016
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800923/
https://www.ncbi.nlm.nih.gov/pubmed/33473434
http://dx.doi.org/10.1080/23802359.2016.1144094
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author Li, Jia
Yu, Hui
Ruan, Zhiqiang
Ma, Xingyu
Zhang, Jimin
Wang, Min
Shi, Qiong
Bian, Chao
author_facet Li, Jia
Yu, Hui
Ruan, Zhiqiang
Ma, Xingyu
Zhang, Jimin
Wang, Min
Shi, Qiong
Bian, Chao
author_sort Li, Jia
collection PubMed
description Eastern paradise fish, Polynemus dubius (also called P. longipectoralis), lives in rivers of the Southeastern Asia. Although its whole genome is not available, we first obtained its complete mitochondrial genome through next-generation sequencing. The length of its mitochondrial genome is 16 568 bp with 13 protein-coding genes, two rRNA genes, 22 tRNA genes and one control region. The distribution and arrangement of genes in the mitochondrial genome are similar to those of other vertebrates. The GC content is 43.08%, similar to the reported P. paradiseus. A phylogenetic tree was constructed to compare with nine related species by using MEGA 6.0. Through phylogenetic analysis, the relationship of species within the Polynemus genus is determined.
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spelling pubmed-78009232021-01-19 The complete mitochondrial genome of Eastern paradise fish (Polynemus dubius) Li, Jia Yu, Hui Ruan, Zhiqiang Ma, Xingyu Zhang, Jimin Wang, Min Shi, Qiong Bian, Chao Mitochondrial DNA B Resour Mitogenome Announcement Eastern paradise fish, Polynemus dubius (also called P. longipectoralis), lives in rivers of the Southeastern Asia. Although its whole genome is not available, we first obtained its complete mitochondrial genome through next-generation sequencing. The length of its mitochondrial genome is 16 568 bp with 13 protein-coding genes, two rRNA genes, 22 tRNA genes and one control region. The distribution and arrangement of genes in the mitochondrial genome are similar to those of other vertebrates. The GC content is 43.08%, similar to the reported P. paradiseus. A phylogenetic tree was constructed to compare with nine related species by using MEGA 6.0. Through phylogenetic analysis, the relationship of species within the Polynemus genus is determined. Taylor & Francis 2016-03-28 /pmc/articles/PMC7800923/ /pubmed/33473434 http://dx.doi.org/10.1080/23802359.2016.1144094 Text en © 2016 The Author(s). Published by Taylor & Francis. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Li, Jia
Yu, Hui
Ruan, Zhiqiang
Ma, Xingyu
Zhang, Jimin
Wang, Min
Shi, Qiong
Bian, Chao
The complete mitochondrial genome of Eastern paradise fish (Polynemus dubius)
title The complete mitochondrial genome of Eastern paradise fish (Polynemus dubius)
title_full The complete mitochondrial genome of Eastern paradise fish (Polynemus dubius)
title_fullStr The complete mitochondrial genome of Eastern paradise fish (Polynemus dubius)
title_full_unstemmed The complete mitochondrial genome of Eastern paradise fish (Polynemus dubius)
title_short The complete mitochondrial genome of Eastern paradise fish (Polynemus dubius)
title_sort complete mitochondrial genome of eastern paradise fish (polynemus dubius)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800923/
https://www.ncbi.nlm.nih.gov/pubmed/33473434
http://dx.doi.org/10.1080/23802359.2016.1144094
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