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The complete mitochondrial genome of Pelecanus occidentalis (Pelecaniformes: Pelecanidae) and its phylogenetic analysis
Pelecanus occidentalis, in the order Pelecaniformes, is one of the most abundant and widespread waterbird species in the coast of America. However, the phylogenetic relationships among Pelecaniformes, Suliformes, and Ciconiiformes remain unresolved, particularly in Pelecanidae and Ciconiidae. In thi...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2018
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800924/ https://www.ncbi.nlm.nih.gov/pubmed/33474321 http://dx.doi.org/10.1080/23802359.2018.1491337 |
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author | Huang, Tian Peng, Jiao Zhao, Yunlin Xu, Zhenggang |
author_facet | Huang, Tian Peng, Jiao Zhao, Yunlin Xu, Zhenggang |
author_sort | Huang, Tian |
collection | PubMed |
description | Pelecanus occidentalis, in the order Pelecaniformes, is one of the most abundant and widespread waterbird species in the coast of America. However, the phylogenetic relationships among Pelecaniformes, Suliformes, and Ciconiiformes remain unresolved, particularly in Pelecanidae and Ciconiidae. In this study, we first sequenced and described the complete mitochondrial genome and phylogeny of P. occidentalis. The whole genome of P. occidentalis was 17,315 bp in length, and contained 13 protein-coding genes, 21 transfer RNA genes, two ribosome RNA genes, and one non-coding control region. The overall base composition of the mitochondrial DNA was 30.1% for A, 23.7% for T, 31.5% for C, and 14.6% for G, with a GC content of 46.1%. A phylogenetic tree confirmed that P. occidentalis (Pelecaniformes) was sister to C. boyciana (Ciconiiformes), and Ardeidae and Threskiornithidae were both monophyletic group. This information will be useful in the current understanding of the phylogeny and evolution of Pelecaniformes. |
format | Online Article Text |
id | pubmed-7800924 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78009242021-01-19 The complete mitochondrial genome of Pelecanus occidentalis (Pelecaniformes: Pelecanidae) and its phylogenetic analysis Huang, Tian Peng, Jiao Zhao, Yunlin Xu, Zhenggang Mitochondrial DNA B Resour Mitogenome Announcement Pelecanus occidentalis, in the order Pelecaniformes, is one of the most abundant and widespread waterbird species in the coast of America. However, the phylogenetic relationships among Pelecaniformes, Suliformes, and Ciconiiformes remain unresolved, particularly in Pelecanidae and Ciconiidae. In this study, we first sequenced and described the complete mitochondrial genome and phylogeny of P. occidentalis. The whole genome of P. occidentalis was 17,315 bp in length, and contained 13 protein-coding genes, 21 transfer RNA genes, two ribosome RNA genes, and one non-coding control region. The overall base composition of the mitochondrial DNA was 30.1% for A, 23.7% for T, 31.5% for C, and 14.6% for G, with a GC content of 46.1%. A phylogenetic tree confirmed that P. occidentalis (Pelecaniformes) was sister to C. boyciana (Ciconiiformes), and Ardeidae and Threskiornithidae were both monophyletic group. This information will be useful in the current understanding of the phylogeny and evolution of Pelecaniformes. Taylor & Francis 2018-07-11 /pmc/articles/PMC7800924/ /pubmed/33474321 http://dx.doi.org/10.1080/23802359.2018.1491337 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Huang, Tian Peng, Jiao Zhao, Yunlin Xu, Zhenggang The complete mitochondrial genome of Pelecanus occidentalis (Pelecaniformes: Pelecanidae) and its phylogenetic analysis |
title | The complete mitochondrial genome of Pelecanus occidentalis (Pelecaniformes: Pelecanidae) and its phylogenetic analysis |
title_full | The complete mitochondrial genome of Pelecanus occidentalis (Pelecaniformes: Pelecanidae) and its phylogenetic analysis |
title_fullStr | The complete mitochondrial genome of Pelecanus occidentalis (Pelecaniformes: Pelecanidae) and its phylogenetic analysis |
title_full_unstemmed | The complete mitochondrial genome of Pelecanus occidentalis (Pelecaniformes: Pelecanidae) and its phylogenetic analysis |
title_short | The complete mitochondrial genome of Pelecanus occidentalis (Pelecaniformes: Pelecanidae) and its phylogenetic analysis |
title_sort | complete mitochondrial genome of pelecanus occidentalis (pelecaniformes: pelecanidae) and its phylogenetic analysis |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800924/ https://www.ncbi.nlm.nih.gov/pubmed/33474321 http://dx.doi.org/10.1080/23802359.2018.1491337 |
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