Cargando…
Characterization of the complete mitochondrial genome of the orange swift, Triodia sylvina
In this study, the complete mitochondrial genome of orange swift, Triodia sylvina, was recovered through Illumina sequencing data. This complete mitochondrial genome of T. sylvina is 15,040 bp in length and has a base composition of A (41.0%), T (41.2%), C (10.4%), G (7.5%), demonstrating an extreme...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800931/ https://www.ncbi.nlm.nih.gov/pubmed/33474231 http://dx.doi.org/10.1080/23802359.2018.1467223 |
_version_ | 1783635463819493376 |
---|---|
author | Li, Chao Li, Lili Lu, Zengbin Sun, Yixin Liu, Li Dong, Song Men, Xingyuan |
author_facet | Li, Chao Li, Lili Lu, Zengbin Sun, Yixin Liu, Li Dong, Song Men, Xingyuan |
author_sort | Li, Chao |
collection | PubMed |
description | In this study, the complete mitochondrial genome of orange swift, Triodia sylvina, was recovered through Illumina sequencing data. This complete mitochondrial genome of T. sylvina is 15,040 bp in length and has a base composition of A (41.0%), T (41.2%), C (10.4%), G (7.5%), demonstrating an extreme bias of high AT content (82.2%). The mitochondrial genome contains a typically conserved structure among moth mitogenomes, encoding 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, two ribosomal RNA (12S rRNA and 16S rRNA) genes and a control region (D-loop region). Seven PCGs were located on the H-strand, others were located on the L-strand. ATP8 gene and ATP6 gene were overlapped by 6 bp. ND4 gene and ND4L gene were overlapped by 9 bp. The whole mt genome of T. sylvina and other moth and butterfly mitogenomes (100 species, in total) were used for phylogenetic analysis. The result indicated T. sylvina represents a distinct genus, which separated far from genus Hepialus. |
format | Online Article Text |
id | pubmed-7800931 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78009312021-01-19 Characterization of the complete mitochondrial genome of the orange swift, Triodia sylvina Li, Chao Li, Lili Lu, Zengbin Sun, Yixin Liu, Li Dong, Song Men, Xingyuan Mitochondrial DNA B Resour Mitogenome Announcement In this study, the complete mitochondrial genome of orange swift, Triodia sylvina, was recovered through Illumina sequencing data. This complete mitochondrial genome of T. sylvina is 15,040 bp in length and has a base composition of A (41.0%), T (41.2%), C (10.4%), G (7.5%), demonstrating an extreme bias of high AT content (82.2%). The mitochondrial genome contains a typically conserved structure among moth mitogenomes, encoding 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, two ribosomal RNA (12S rRNA and 16S rRNA) genes and a control region (D-loop region). Seven PCGs were located on the H-strand, others were located on the L-strand. ATP8 gene and ATP6 gene were overlapped by 6 bp. ND4 gene and ND4L gene were overlapped by 9 bp. The whole mt genome of T. sylvina and other moth and butterfly mitogenomes (100 species, in total) were used for phylogenetic analysis. The result indicated T. sylvina represents a distinct genus, which separated far from genus Hepialus. Taylor & Francis 2018-04-27 /pmc/articles/PMC7800931/ /pubmed/33474231 http://dx.doi.org/10.1080/23802359.2018.1467223 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Li, Chao Li, Lili Lu, Zengbin Sun, Yixin Liu, Li Dong, Song Men, Xingyuan Characterization of the complete mitochondrial genome of the orange swift, Triodia sylvina |
title | Characterization of the complete mitochondrial genome of the orange swift, Triodia sylvina |
title_full | Characterization of the complete mitochondrial genome of the orange swift, Triodia sylvina |
title_fullStr | Characterization of the complete mitochondrial genome of the orange swift, Triodia sylvina |
title_full_unstemmed | Characterization of the complete mitochondrial genome of the orange swift, Triodia sylvina |
title_short | Characterization of the complete mitochondrial genome of the orange swift, Triodia sylvina |
title_sort | characterization of the complete mitochondrial genome of the orange swift, triodia sylvina |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800931/ https://www.ncbi.nlm.nih.gov/pubmed/33474231 http://dx.doi.org/10.1080/23802359.2018.1467223 |
work_keys_str_mv | AT lichao characterizationofthecompletemitochondrialgenomeoftheorangeswifttriodiasylvina AT lilili characterizationofthecompletemitochondrialgenomeoftheorangeswifttriodiasylvina AT luzengbin characterizationofthecompletemitochondrialgenomeoftheorangeswifttriodiasylvina AT sunyixin characterizationofthecompletemitochondrialgenomeoftheorangeswifttriodiasylvina AT liuli characterizationofthecompletemitochondrialgenomeoftheorangeswifttriodiasylvina AT dongsong characterizationofthecompletemitochondrialgenomeoftheorangeswifttriodiasylvina AT menxingyuan characterizationofthecompletemitochondrialgenomeoftheorangeswifttriodiasylvina |