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The complete chloroplast genome sequence of wild banana, Musa balbisiana variety ’Pisang Klutuk Wulung’ (Musaceae)
Musa balbisiana is a wild-type species of banana, endemic to Southern China, Eastern South Asia, and Northern Southeast Asia. The M. balbisiana variety ’Pisang Klutuk Wulung’ is one of the possible ancestral parents of modern cultivated bananas, but its wild populations are now in decline. In this s...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2018
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800968/ https://www.ncbi.nlm.nih.gov/pubmed/33490514 http://dx.doi.org/10.1080/23802359.2018.1462123 |
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author | Niu, Ying-Feng Gao, Cheng-Wen Liu, Jin |
author_facet | Niu, Ying-Feng Gao, Cheng-Wen Liu, Jin |
author_sort | Niu, Ying-Feng |
collection | PubMed |
description | Musa balbisiana is a wild-type species of banana, endemic to Southern China, Eastern South Asia, and Northern Southeast Asia. The M. balbisiana variety ’Pisang Klutuk Wulung’ is one of the possible ancestral parents of modern cultivated bananas, but its wild populations are now in decline. In this study, we report the complete chloroplast genome sequence of wild banana, M. balbisiana diploid variety ’Pisang Klutuk Wulung’. The M. balbisiana chloroplast genome is found to be 169,458 bp in length and has a base composition of A (31.44%), G (18.16%), C (18.61%), and T (31.79%). The genome contained two short inverted repeat (IRa and IRb) regions (35,084 bp), which were separated by a large single copy (LSC) region (87,805 bp) and a small single copy (SSC) region (11,485 bp). The genome encodes 113 unique genes, including 79 protein-coding genes, 30 transfer RNA (tRNA) genes, and four ribosomal RNA (rRNA) genes. Further, phylogenetic analysis suggested that M. balbisiana is closely related to the species of M. textilis. This complete chloroplast genome will provide valuable information for the development of DNA markers for future population and conservation studies of M. balbisiana. |
format | Online Article Text |
id | pubmed-7800968 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78009682021-01-21 The complete chloroplast genome sequence of wild banana, Musa balbisiana variety ’Pisang Klutuk Wulung’ (Musaceae) Niu, Ying-Feng Gao, Cheng-Wen Liu, Jin Mitochondrial DNA B Resour Mitogenome Announcement Musa balbisiana is a wild-type species of banana, endemic to Southern China, Eastern South Asia, and Northern Southeast Asia. The M. balbisiana variety ’Pisang Klutuk Wulung’ is one of the possible ancestral parents of modern cultivated bananas, but its wild populations are now in decline. In this study, we report the complete chloroplast genome sequence of wild banana, M. balbisiana diploid variety ’Pisang Klutuk Wulung’. The M. balbisiana chloroplast genome is found to be 169,458 bp in length and has a base composition of A (31.44%), G (18.16%), C (18.61%), and T (31.79%). The genome contained two short inverted repeat (IRa and IRb) regions (35,084 bp), which were separated by a large single copy (LSC) region (87,805 bp) and a small single copy (SSC) region (11,485 bp). The genome encodes 113 unique genes, including 79 protein-coding genes, 30 transfer RNA (tRNA) genes, and four ribosomal RNA (rRNA) genes. Further, phylogenetic analysis suggested that M. balbisiana is closely related to the species of M. textilis. This complete chloroplast genome will provide valuable information for the development of DNA markers for future population and conservation studies of M. balbisiana. Taylor & Francis 2018-04-12 /pmc/articles/PMC7800968/ /pubmed/33490514 http://dx.doi.org/10.1080/23802359.2018.1462123 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Niu, Ying-Feng Gao, Cheng-Wen Liu, Jin The complete chloroplast genome sequence of wild banana, Musa balbisiana variety ’Pisang Klutuk Wulung’ (Musaceae) |
title | The complete chloroplast genome sequence of wild banana, Musa balbisiana variety ’Pisang Klutuk Wulung’ (Musaceae) |
title_full | The complete chloroplast genome sequence of wild banana, Musa balbisiana variety ’Pisang Klutuk Wulung’ (Musaceae) |
title_fullStr | The complete chloroplast genome sequence of wild banana, Musa balbisiana variety ’Pisang Klutuk Wulung’ (Musaceae) |
title_full_unstemmed | The complete chloroplast genome sequence of wild banana, Musa balbisiana variety ’Pisang Klutuk Wulung’ (Musaceae) |
title_short | The complete chloroplast genome sequence of wild banana, Musa balbisiana variety ’Pisang Klutuk Wulung’ (Musaceae) |
title_sort | complete chloroplast genome sequence of wild banana, musa balbisiana variety ’pisang klutuk wulung’ (musaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800968/ https://www.ncbi.nlm.nih.gov/pubmed/33490514 http://dx.doi.org/10.1080/23802359.2018.1462123 |
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