Cargando…
The complete mitochondrial genome sequence of the giant mudskipper, Periophthalmodon schlosseri (Perciformes: gobiidae)
The complete mitochondrial genome sequence of the giant mudskipper, Periophthalmodon schlosseri, was first reported in this study. The circle genome is 16 470 bp in length, with the base composition of 28.4% T, 15.4% G, 29.2% A and 27.0% C. The mitogenome includes 13 protein-coding genes, 22 transfe...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800980/ https://www.ncbi.nlm.nih.gov/pubmed/33490412 http://dx.doi.org/10.1080/23802359.2016.1202742 |
_version_ | 1783635475333906432 |
---|---|
author | Yi, Yunhai Zhang, Kai Chen, Jieming Ruan, Zhiqiang You, Xinxin Shi, Qiong |
author_facet | Yi, Yunhai Zhang, Kai Chen, Jieming Ruan, Zhiqiang You, Xinxin Shi, Qiong |
author_sort | Yi, Yunhai |
collection | PubMed |
description | The complete mitochondrial genome sequence of the giant mudskipper, Periophthalmodon schlosseri, was first reported in this study. The circle genome is 16 470 bp in length, with the base composition of 28.4% T, 15.4% G, 29.2% A and 27.0% C. The mitogenome includes 13 protein-coding genes, 22 transfer RNA genes, two ribosomal RNA genes and one D-loop region. Only the NADH dehydrogenase subunit 6 (NAD6) and eight tRNA genes are encoded on the light strand. The mitochondrial gene arrangement of P. schlosseri is similar to those of most other gobies. The phylogenetic analysis using the neighbor-joining method showed that the kinship between Periophthalmodon and Periophthalmus is closer than those between Periophthalmodon and other selected genera. Our complete mitogenome data are going to provide the basis for taxonomic and phylogenetic research of amphibious mudskippers. |
format | Online Article Text |
id | pubmed-7800980 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78009802021-01-21 The complete mitochondrial genome sequence of the giant mudskipper, Periophthalmodon schlosseri (Perciformes: gobiidae) Yi, Yunhai Zhang, Kai Chen, Jieming Ruan, Zhiqiang You, Xinxin Shi, Qiong Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome sequence of the giant mudskipper, Periophthalmodon schlosseri, was first reported in this study. The circle genome is 16 470 bp in length, with the base composition of 28.4% T, 15.4% G, 29.2% A and 27.0% C. The mitogenome includes 13 protein-coding genes, 22 transfer RNA genes, two ribosomal RNA genes and one D-loop region. Only the NADH dehydrogenase subunit 6 (NAD6) and eight tRNA genes are encoded on the light strand. The mitochondrial gene arrangement of P. schlosseri is similar to those of most other gobies. The phylogenetic analysis using the neighbor-joining method showed that the kinship between Periophthalmodon and Periophthalmus is closer than those between Periophthalmodon and other selected genera. Our complete mitogenome data are going to provide the basis for taxonomic and phylogenetic research of amphibious mudskippers. Taylor & Francis 2016-08-31 /pmc/articles/PMC7800980/ /pubmed/33490412 http://dx.doi.org/10.1080/23802359.2016.1202742 Text en © 2016 BGI. Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Yi, Yunhai Zhang, Kai Chen, Jieming Ruan, Zhiqiang You, Xinxin Shi, Qiong The complete mitochondrial genome sequence of the giant mudskipper, Periophthalmodon schlosseri (Perciformes: gobiidae) |
title | The complete mitochondrial genome sequence of the giant mudskipper, Periophthalmodon schlosseri (Perciformes: gobiidae) |
title_full | The complete mitochondrial genome sequence of the giant mudskipper, Periophthalmodon schlosseri (Perciformes: gobiidae) |
title_fullStr | The complete mitochondrial genome sequence of the giant mudskipper, Periophthalmodon schlosseri (Perciformes: gobiidae) |
title_full_unstemmed | The complete mitochondrial genome sequence of the giant mudskipper, Periophthalmodon schlosseri (Perciformes: gobiidae) |
title_short | The complete mitochondrial genome sequence of the giant mudskipper, Periophthalmodon schlosseri (Perciformes: gobiidae) |
title_sort | complete mitochondrial genome sequence of the giant mudskipper, periophthalmodon schlosseri (perciformes: gobiidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800980/ https://www.ncbi.nlm.nih.gov/pubmed/33490412 http://dx.doi.org/10.1080/23802359.2016.1202742 |
work_keys_str_mv | AT yiyunhai thecompletemitochondrialgenomesequenceofthegiantmudskipperperiophthalmodonschlosseriperciformesgobiidae AT zhangkai thecompletemitochondrialgenomesequenceofthegiantmudskipperperiophthalmodonschlosseriperciformesgobiidae AT chenjieming thecompletemitochondrialgenomesequenceofthegiantmudskipperperiophthalmodonschlosseriperciformesgobiidae AT ruanzhiqiang thecompletemitochondrialgenomesequenceofthegiantmudskipperperiophthalmodonschlosseriperciformesgobiidae AT youxinxin thecompletemitochondrialgenomesequenceofthegiantmudskipperperiophthalmodonschlosseriperciformesgobiidae AT shiqiong thecompletemitochondrialgenomesequenceofthegiantmudskipperperiophthalmodonschlosseriperciformesgobiidae AT yiyunhai completemitochondrialgenomesequenceofthegiantmudskipperperiophthalmodonschlosseriperciformesgobiidae AT zhangkai completemitochondrialgenomesequenceofthegiantmudskipperperiophthalmodonschlosseriperciformesgobiidae AT chenjieming completemitochondrialgenomesequenceofthegiantmudskipperperiophthalmodonschlosseriperciformesgobiidae AT ruanzhiqiang completemitochondrialgenomesequenceofthegiantmudskipperperiophthalmodonschlosseriperciformesgobiidae AT youxinxin completemitochondrialgenomesequenceofthegiantmudskipperperiophthalmodonschlosseriperciformesgobiidae AT shiqiong completemitochondrialgenomesequenceofthegiantmudskipperperiophthalmodonschlosseriperciformesgobiidae |