Characterization of the complete chloroplast genome of Allium prattii

The genus Allium is one of the world’s largest monocot genera. However, few reports on the complete chloroplast genome of Allium plants are reported. In this study, we reported the complete chloroplast genome of Allium prattii. The genome sequence was 154,482 bp in length, including a large single c...

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Detalles Bibliográficos
Autores principales: Jin, Fang-Yu, Xie, Deng-Feng, Zhou, Song-Dong, He, Xing-Jin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800986/
https://www.ncbi.nlm.nih.gov/pubmed/33490492
http://dx.doi.org/10.1080/23802359.2018.1436994
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author Jin, Fang-Yu
Xie, Deng-Feng
Zhou, Song-Dong
He, Xing-Jin
author_facet Jin, Fang-Yu
Xie, Deng-Feng
Zhou, Song-Dong
He, Xing-Jin
author_sort Jin, Fang-Yu
collection PubMed
description The genus Allium is one of the world’s largest monocot genera. However, few reports on the complete chloroplast genome of Allium plants are reported. In this study, we reported the complete chloroplast genome of Allium prattii. The genome sequence was 154,482 bp in length, including a large single copy region (LSC) of 83,392 bp and a small single copy region (SSC) of 18,064 bp, which were separated by two inverted repeat (IR) regions of 26,513 bp. The complete chloroplast genome contains 131 genes, including 85 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Phylogenetic analysis with several reported chloroplast genomes showed that A. prattii has a close genetic relationship with A. cepa and A. sativum.
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spelling pubmed-78009862021-01-21 Characterization of the complete chloroplast genome of Allium prattii Jin, Fang-Yu Xie, Deng-Feng Zhou, Song-Dong He, Xing-Jin Mitochondrial DNA B Resour Mitogenome Announcement The genus Allium is one of the world’s largest monocot genera. However, few reports on the complete chloroplast genome of Allium plants are reported. In this study, we reported the complete chloroplast genome of Allium prattii. The genome sequence was 154,482 bp in length, including a large single copy region (LSC) of 83,392 bp and a small single copy region (SSC) of 18,064 bp, which were separated by two inverted repeat (IR) regions of 26,513 bp. The complete chloroplast genome contains 131 genes, including 85 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Phylogenetic analysis with several reported chloroplast genomes showed that A. prattii has a close genetic relationship with A. cepa and A. sativum. Taylor & Francis 2018-02-07 /pmc/articles/PMC7800986/ /pubmed/33490492 http://dx.doi.org/10.1080/23802359.2018.1436994 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Jin, Fang-Yu
Xie, Deng-Feng
Zhou, Song-Dong
He, Xing-Jin
Characterization of the complete chloroplast genome of Allium prattii
title Characterization of the complete chloroplast genome of Allium prattii
title_full Characterization of the complete chloroplast genome of Allium prattii
title_fullStr Characterization of the complete chloroplast genome of Allium prattii
title_full_unstemmed Characterization of the complete chloroplast genome of Allium prattii
title_short Characterization of the complete chloroplast genome of Allium prattii
title_sort characterization of the complete chloroplast genome of allium prattii
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800986/
https://www.ncbi.nlm.nih.gov/pubmed/33490492
http://dx.doi.org/10.1080/23802359.2018.1436994
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