Complete chloroplast genome sequence of the red silk cotton tree (Bombax ceiba)

Bombax ceiba L. is a beautiful and deciduous tree with great ecological and economic importance. The third generation sequencing of chloroplast genome of B. ceiba was conducted on the PacBio sequencing platform (Pacific Biosciences). The complete chloroplast genome was 158,997 bp, which contains a l...

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Autores principales: Gao, Yong, Wang, Haibo, Liu, Chao, Chu, Honglong, Yan, Yuehui, Tang, Lizhou
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800995/
https://www.ncbi.nlm.nih.gov/pubmed/33490504
http://dx.doi.org/10.1080/23802359.2017.1422399
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author Gao, Yong
Wang, Haibo
Liu, Chao
Chu, Honglong
Yan, Yuehui
Tang, Lizhou
author_facet Gao, Yong
Wang, Haibo
Liu, Chao
Chu, Honglong
Yan, Yuehui
Tang, Lizhou
author_sort Gao, Yong
collection PubMed
description Bombax ceiba L. is a beautiful and deciduous tree with great ecological and economic importance. The third generation sequencing of chloroplast genome of B. ceiba was conducted on the PacBio sequencing platform (Pacific Biosciences). The complete chloroplast genome was 158,997 bp, which contains a large single-copy (LSC) region (89,021 bp), a small single-copy (SSC) region (21,110 bp), and two inverted repeats (IRs) (24,433 bp). In total, 116 genes were annotated, including 81 protein-coding genes, eight rRNA genes, and 27 tRNA genes. The phylogenetic tree showed that B. ceiba was closely clustered with one clade of Malvaceae.
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spelling pubmed-78009952021-01-21 Complete chloroplast genome sequence of the red silk cotton tree (Bombax ceiba) Gao, Yong Wang, Haibo Liu, Chao Chu, Honglong Yan, Yuehui Tang, Lizhou Mitochondrial DNA B Resour Mitogenome Announcement Bombax ceiba L. is a beautiful and deciduous tree with great ecological and economic importance. The third generation sequencing of chloroplast genome of B. ceiba was conducted on the PacBio sequencing platform (Pacific Biosciences). The complete chloroplast genome was 158,997 bp, which contains a large single-copy (LSC) region (89,021 bp), a small single-copy (SSC) region (21,110 bp), and two inverted repeats (IRs) (24,433 bp). In total, 116 genes were annotated, including 81 protein-coding genes, eight rRNA genes, and 27 tRNA genes. The phylogenetic tree showed that B. ceiba was closely clustered with one clade of Malvaceae. Taylor & Francis 2018-03-05 /pmc/articles/PMC7800995/ /pubmed/33490504 http://dx.doi.org/10.1080/23802359.2017.1422399 Text en © 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Gao, Yong
Wang, Haibo
Liu, Chao
Chu, Honglong
Yan, Yuehui
Tang, Lizhou
Complete chloroplast genome sequence of the red silk cotton tree (Bombax ceiba)
title Complete chloroplast genome sequence of the red silk cotton tree (Bombax ceiba)
title_full Complete chloroplast genome sequence of the red silk cotton tree (Bombax ceiba)
title_fullStr Complete chloroplast genome sequence of the red silk cotton tree (Bombax ceiba)
title_full_unstemmed Complete chloroplast genome sequence of the red silk cotton tree (Bombax ceiba)
title_short Complete chloroplast genome sequence of the red silk cotton tree (Bombax ceiba)
title_sort complete chloroplast genome sequence of the red silk cotton tree (bombax ceiba)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800995/
https://www.ncbi.nlm.nih.gov/pubmed/33490504
http://dx.doi.org/10.1080/23802359.2017.1422399
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