The complete mitochondrial genome of Thryssa hamiltonii and phylogenetic analysis of Engraulidae (Clupeiformes; Clupeoidei)

This study aimed to elucidate the complete mitochondrial genome (mitogenome) of Thryssa hamiltonii (Clupeiformes: Engraulidae). The circular mitogenome is 16,737-bp-long, including 13 protein-coding genes, 22 tRNA genes, two rRNA genes, and a non-coding control region as observed in other vertebrate...

Descripción completa

Detalles Bibliográficos
Autores principales: Wang, Pengfei, Zhao, Chao, Fan, Sigang, Yan, LuLu, Qiu, Lihua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7801017/
https://www.ncbi.nlm.nih.gov/pubmed/33490519
http://dx.doi.org/10.1080/23802359.2018.1467232
_version_ 1783635483895529472
author Wang, Pengfei
Zhao, Chao
Fan, Sigang
Yan, LuLu
Qiu, Lihua
author_facet Wang, Pengfei
Zhao, Chao
Fan, Sigang
Yan, LuLu
Qiu, Lihua
author_sort Wang, Pengfei
collection PubMed
description This study aimed to elucidate the complete mitochondrial genome (mitogenome) of Thryssa hamiltonii (Clupeiformes: Engraulidae). The circular mitogenome is 16,737-bp-long, including 13 protein-coding genes, 22 tRNA genes, two rRNA genes, and a non-coding control region as observed in other vertebrates. The overall base composition is as follows: A, 30.69%; T, 24.86%; C, 28.17%; G, 16.29%; a slight A + T bias of 55.55%. Phylogenetic analysis of 16 species in family Engraulidae revealed that T. hamiltonii clustered in subfamily Engraulinae and is closely related to Lycothrissa crocodilus. The present data will contribute to future phylogenetic studies on members of family Engraulidae and conservation strategies for T. hamiltonii.
format Online
Article
Text
id pubmed-7801017
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-78010172021-01-21 The complete mitochondrial genome of Thryssa hamiltonii and phylogenetic analysis of Engraulidae (Clupeiformes; Clupeoidei) Wang, Pengfei Zhao, Chao Fan, Sigang Yan, LuLu Qiu, Lihua Mitochondrial DNA B Resour Mitogenome Announcement This study aimed to elucidate the complete mitochondrial genome (mitogenome) of Thryssa hamiltonii (Clupeiformes: Engraulidae). The circular mitogenome is 16,737-bp-long, including 13 protein-coding genes, 22 tRNA genes, two rRNA genes, and a non-coding control region as observed in other vertebrates. The overall base composition is as follows: A, 30.69%; T, 24.86%; C, 28.17%; G, 16.29%; a slight A + T bias of 55.55%. Phylogenetic analysis of 16 species in family Engraulidae revealed that T. hamiltonii clustered in subfamily Engraulinae and is closely related to Lycothrissa crocodilus. The present data will contribute to future phylogenetic studies on members of family Engraulidae and conservation strategies for T. hamiltonii. Taylor & Francis 2018-04-27 /pmc/articles/PMC7801017/ /pubmed/33490519 http://dx.doi.org/10.1080/23802359.2018.1467232 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Wang, Pengfei
Zhao, Chao
Fan, Sigang
Yan, LuLu
Qiu, Lihua
The complete mitochondrial genome of Thryssa hamiltonii and phylogenetic analysis of Engraulidae (Clupeiformes; Clupeoidei)
title The complete mitochondrial genome of Thryssa hamiltonii and phylogenetic analysis of Engraulidae (Clupeiformes; Clupeoidei)
title_full The complete mitochondrial genome of Thryssa hamiltonii and phylogenetic analysis of Engraulidae (Clupeiformes; Clupeoidei)
title_fullStr The complete mitochondrial genome of Thryssa hamiltonii and phylogenetic analysis of Engraulidae (Clupeiformes; Clupeoidei)
title_full_unstemmed The complete mitochondrial genome of Thryssa hamiltonii and phylogenetic analysis of Engraulidae (Clupeiformes; Clupeoidei)
title_short The complete mitochondrial genome of Thryssa hamiltonii and phylogenetic analysis of Engraulidae (Clupeiformes; Clupeoidei)
title_sort complete mitochondrial genome of thryssa hamiltonii and phylogenetic analysis of engraulidae (clupeiformes; clupeoidei)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7801017/
https://www.ncbi.nlm.nih.gov/pubmed/33490519
http://dx.doi.org/10.1080/23802359.2018.1467232
work_keys_str_mv AT wangpengfei thecompletemitochondrialgenomeofthryssahamiltoniiandphylogeneticanalysisofengraulidaeclupeiformesclupeoidei
AT zhaochao thecompletemitochondrialgenomeofthryssahamiltoniiandphylogeneticanalysisofengraulidaeclupeiformesclupeoidei
AT fansigang thecompletemitochondrialgenomeofthryssahamiltoniiandphylogeneticanalysisofengraulidaeclupeiformesclupeoidei
AT yanlulu thecompletemitochondrialgenomeofthryssahamiltoniiandphylogeneticanalysisofengraulidaeclupeiformesclupeoidei
AT qiulihua thecompletemitochondrialgenomeofthryssahamiltoniiandphylogeneticanalysisofengraulidaeclupeiformesclupeoidei
AT wangpengfei completemitochondrialgenomeofthryssahamiltoniiandphylogeneticanalysisofengraulidaeclupeiformesclupeoidei
AT zhaochao completemitochondrialgenomeofthryssahamiltoniiandphylogeneticanalysisofengraulidaeclupeiformesclupeoidei
AT fansigang completemitochondrialgenomeofthryssahamiltoniiandphylogeneticanalysisofengraulidaeclupeiformesclupeoidei
AT yanlulu completemitochondrialgenomeofthryssahamiltoniiandphylogeneticanalysisofengraulidaeclupeiformesclupeoidei
AT qiulihua completemitochondrialgenomeofthryssahamiltoniiandphylogeneticanalysisofengraulidaeclupeiformesclupeoidei

Ejemplares similares