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Complete sequence determination and analysis of mitochondrial genome in Oreonectes daqikongensis
Oreonectes daqikongensi revealed that the complete length of its mitochondrial genome was 16,578 bp, composed of A (30.7%), T (25.6%), G (16.2%), C (27.5%) and A + T (56.3%). Its genetic constitution and arrangement were consistent with those of other Osteichthyes, including 13 protein-coding genes,...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7801021/ https://www.ncbi.nlm.nih.gov/pubmed/33490411 http://dx.doi.org/10.1080/23802359.2016.1202739 |
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author | Deng, Huaiqing Wen, Huamei Xiao, Ning Zhou, Jiang |
author_facet | Deng, Huaiqing Wen, Huamei Xiao, Ning Zhou, Jiang |
author_sort | Deng, Huaiqing |
collection | PubMed |
description | Oreonectes daqikongensi revealed that the complete length of its mitochondrial genome was 16,578 bp, composed of A (30.7%), T (25.6%), G (16.2%), C (27.5%) and A + T (56.3%). Its genetic constitution and arrangement were consistent with those of other Osteichthyes, including 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and 1 control area (D-loop). All genes were encoded by the H-strand, except for 1 protein-coding gene (ND6) and 8 tRNA genes (tRNA-Gln, tRNA-Ala, tRNA-Cys, tRNA-Asn, tRNA-Tyr, tRNA-Ser, tRNA-Glu and tRNA-Pro) are encoded by the L-strand. The mitochondrial genes were arranged very closely. There were four gene overlapping regions, with an overall length of 21 bp and a base covering number range of 1–14 bp, and 23 intergenic regions, with an overall length of 147 bp and an intergenic length range of 1–19 bp. There were 10 gene pairs that were neither overlapping nor intergenic. |
format | Online Article Text |
id | pubmed-7801021 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78010212021-01-21 Complete sequence determination and analysis of mitochondrial genome in Oreonectes daqikongensis Deng, Huaiqing Wen, Huamei Xiao, Ning Zhou, Jiang Mitochondrial DNA B Resour Mitogenome Announcement Oreonectes daqikongensi revealed that the complete length of its mitochondrial genome was 16,578 bp, composed of A (30.7%), T (25.6%), G (16.2%), C (27.5%) and A + T (56.3%). Its genetic constitution and arrangement were consistent with those of other Osteichthyes, including 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and 1 control area (D-loop). All genes were encoded by the H-strand, except for 1 protein-coding gene (ND6) and 8 tRNA genes (tRNA-Gln, tRNA-Ala, tRNA-Cys, tRNA-Asn, tRNA-Tyr, tRNA-Ser, tRNA-Glu and tRNA-Pro) are encoded by the L-strand. The mitochondrial genes were arranged very closely. There were four gene overlapping regions, with an overall length of 21 bp and a base covering number range of 1–14 bp, and 23 intergenic regions, with an overall length of 147 bp and an intergenic length range of 1–19 bp. There were 10 gene pairs that were neither overlapping nor intergenic. Taylor & Francis 2016-09-05 /pmc/articles/PMC7801021/ /pubmed/33490411 http://dx.doi.org/10.1080/23802359.2016.1202739 Text en © 2016 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Deng, Huaiqing Wen, Huamei Xiao, Ning Zhou, Jiang Complete sequence determination and analysis of mitochondrial genome in Oreonectes daqikongensis |
title | Complete sequence determination and analysis of mitochondrial genome in Oreonectes daqikongensis |
title_full | Complete sequence determination and analysis of mitochondrial genome in Oreonectes daqikongensis |
title_fullStr | Complete sequence determination and analysis of mitochondrial genome in Oreonectes daqikongensis |
title_full_unstemmed | Complete sequence determination and analysis of mitochondrial genome in Oreonectes daqikongensis |
title_short | Complete sequence determination and analysis of mitochondrial genome in Oreonectes daqikongensis |
title_sort | complete sequence determination and analysis of mitochondrial genome in oreonectes daqikongensis |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7801021/ https://www.ncbi.nlm.nih.gov/pubmed/33490411 http://dx.doi.org/10.1080/23802359.2016.1202739 |
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