Cargando…
Construction and analysis of a joint diagnosis model of random forest and artificial neural network for heart failure
Heart failure is a global health problem that affects approximately 26 million people worldwide. As conventional diagnostic techniques for heart failure have been in practice with various limitations, it is necessary to develop novel diagnostic models to supplement existing methods. With advances an...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7803554/ https://www.ncbi.nlm.nih.gov/pubmed/33401250 http://dx.doi.org/10.18632/aging.202405 |
_version_ | 1783635964699082752 |
---|---|
author | Tian, Yuqing Yang, Jiefu Lan, Ming Zou, Tong |
author_facet | Tian, Yuqing Yang, Jiefu Lan, Ming Zou, Tong |
author_sort | Tian, Yuqing |
collection | PubMed |
description | Heart failure is a global health problem that affects approximately 26 million people worldwide. As conventional diagnostic techniques for heart failure have been in practice with various limitations, it is necessary to develop novel diagnostic models to supplement existing methods. With advances and improvements in gene sequencing technology in recent years, more heart failure-related genes have been identified. Using existing gene expression data in the Gene Expression Omnibus (GEO) database, we screened differentially expressed genes (DEGs) of heart failure and identified six key genes (HMOX2, SERPINA3, LCN6, CSDC2, FREM1, and ZMAT1) by random forest classifier. Of these genes, CSDC2, FREM1, and ZMAT1 have never been associated with heart failure. We also successfully constructed a new diagnostic model of heart failure using an artificial neural network and verified its diagnostic efficacy in public datasets. |
format | Online Article Text |
id | pubmed-7803554 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-78035542021-01-15 Construction and analysis of a joint diagnosis model of random forest and artificial neural network for heart failure Tian, Yuqing Yang, Jiefu Lan, Ming Zou, Tong Aging (Albany NY) Research Paper Heart failure is a global health problem that affects approximately 26 million people worldwide. As conventional diagnostic techniques for heart failure have been in practice with various limitations, it is necessary to develop novel diagnostic models to supplement existing methods. With advances and improvements in gene sequencing technology in recent years, more heart failure-related genes have been identified. Using existing gene expression data in the Gene Expression Omnibus (GEO) database, we screened differentially expressed genes (DEGs) of heart failure and identified six key genes (HMOX2, SERPINA3, LCN6, CSDC2, FREM1, and ZMAT1) by random forest classifier. Of these genes, CSDC2, FREM1, and ZMAT1 have never been associated with heart failure. We also successfully constructed a new diagnostic model of heart failure using an artificial neural network and verified its diagnostic efficacy in public datasets. Impact Journals 2020-12-26 /pmc/articles/PMC7803554/ /pubmed/33401250 http://dx.doi.org/10.18632/aging.202405 Text en Copyright: © 2020 Tian et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Tian, Yuqing Yang, Jiefu Lan, Ming Zou, Tong Construction and analysis of a joint diagnosis model of random forest and artificial neural network for heart failure |
title | Construction and analysis of a joint diagnosis model of random forest and artificial neural network for heart failure |
title_full | Construction and analysis of a joint diagnosis model of random forest and artificial neural network for heart failure |
title_fullStr | Construction and analysis of a joint diagnosis model of random forest and artificial neural network for heart failure |
title_full_unstemmed | Construction and analysis of a joint diagnosis model of random forest and artificial neural network for heart failure |
title_short | Construction and analysis of a joint diagnosis model of random forest and artificial neural network for heart failure |
title_sort | construction and analysis of a joint diagnosis model of random forest and artificial neural network for heart failure |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7803554/ https://www.ncbi.nlm.nih.gov/pubmed/33401250 http://dx.doi.org/10.18632/aging.202405 |
work_keys_str_mv | AT tianyuqing constructionandanalysisofajointdiagnosismodelofrandomforestandartificialneuralnetworkforheartfailure AT yangjiefu constructionandanalysisofajointdiagnosismodelofrandomforestandartificialneuralnetworkforheartfailure AT lanming constructionandanalysisofajointdiagnosismodelofrandomforestandartificialneuralnetworkforheartfailure AT zoutong constructionandanalysisofajointdiagnosismodelofrandomforestandartificialneuralnetworkforheartfailure |