Cargando…

Engineering calcium signaling of astrocytes for neural–molecular computing logic gates

This paper proposes the use of astrocytes to realize Boolean logic gates, through manipulation of the threshold of [Formula: see text] ion flows between the cells based on the input signals. Through wet-lab experiments that engineer the astrocytes cells with pcDNA3.1-hGPR17 genes as well as chemical...

Descripción completa

Detalles Bibliográficos
Autores principales: Barros, Michael Taynnan, Doan, Phuong, Kandhavelu, Meenakshisundaram, Jennings, Brendan, Balasubramaniam, Sasitharan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7803753/
https://www.ncbi.nlm.nih.gov/pubmed/33436729
http://dx.doi.org/10.1038/s41598-020-79891-x
_version_ 1783636011464523776
author Barros, Michael Taynnan
Doan, Phuong
Kandhavelu, Meenakshisundaram
Jennings, Brendan
Balasubramaniam, Sasitharan
author_facet Barros, Michael Taynnan
Doan, Phuong
Kandhavelu, Meenakshisundaram
Jennings, Brendan
Balasubramaniam, Sasitharan
author_sort Barros, Michael Taynnan
collection PubMed
description This paper proposes the use of astrocytes to realize Boolean logic gates, through manipulation of the threshold of [Formula: see text] ion flows between the cells based on the input signals. Through wet-lab experiments that engineer the astrocytes cells with pcDNA3.1-hGPR17 genes as well as chemical compounds, we show that both AND and OR gates can be implemented by controlling [Formula: see text] signals that flow through the population. A reinforced learning platform is also presented in the paper to optimize the [Formula: see text] activated level and time slot of input signals [Formula: see text] into the gate. This design platform caters for any size and connectivity of the cell population, by taking into consideration the delay and noise produced from the signalling between the cells. To validate the effectiveness of the reinforced learning platform, a [Formula: see text] signalling simulator was used to simulate the signalling between the astrocyte cells. The results from the simulation show that an optimum value for both the [Formula: see text] activated level and time slot of input signals [Formula: see text] is required to achieve up to 90% accuracy for both the AND and OR gates. Our method can be used as the basis for future Neural–Molecular Computing chips, constructed from engineered astrocyte cells, which can form the basis for a new generation of brain implants.
format Online
Article
Text
id pubmed-7803753
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-78037532021-01-13 Engineering calcium signaling of astrocytes for neural–molecular computing logic gates Barros, Michael Taynnan Doan, Phuong Kandhavelu, Meenakshisundaram Jennings, Brendan Balasubramaniam, Sasitharan Sci Rep Article This paper proposes the use of astrocytes to realize Boolean logic gates, through manipulation of the threshold of [Formula: see text] ion flows between the cells based on the input signals. Through wet-lab experiments that engineer the astrocytes cells with pcDNA3.1-hGPR17 genes as well as chemical compounds, we show that both AND and OR gates can be implemented by controlling [Formula: see text] signals that flow through the population. A reinforced learning platform is also presented in the paper to optimize the [Formula: see text] activated level and time slot of input signals [Formula: see text] into the gate. This design platform caters for any size and connectivity of the cell population, by taking into consideration the delay and noise produced from the signalling between the cells. To validate the effectiveness of the reinforced learning platform, a [Formula: see text] signalling simulator was used to simulate the signalling between the astrocyte cells. The results from the simulation show that an optimum value for both the [Formula: see text] activated level and time slot of input signals [Formula: see text] is required to achieve up to 90% accuracy for both the AND and OR gates. Our method can be used as the basis for future Neural–Molecular Computing chips, constructed from engineered astrocyte cells, which can form the basis for a new generation of brain implants. Nature Publishing Group UK 2021-01-12 /pmc/articles/PMC7803753/ /pubmed/33436729 http://dx.doi.org/10.1038/s41598-020-79891-x Text en © The Author(s) 2021 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Barros, Michael Taynnan
Doan, Phuong
Kandhavelu, Meenakshisundaram
Jennings, Brendan
Balasubramaniam, Sasitharan
Engineering calcium signaling of astrocytes for neural–molecular computing logic gates
title Engineering calcium signaling of astrocytes for neural–molecular computing logic gates
title_full Engineering calcium signaling of astrocytes for neural–molecular computing logic gates
title_fullStr Engineering calcium signaling of astrocytes for neural–molecular computing logic gates
title_full_unstemmed Engineering calcium signaling of astrocytes for neural–molecular computing logic gates
title_short Engineering calcium signaling of astrocytes for neural–molecular computing logic gates
title_sort engineering calcium signaling of astrocytes for neural–molecular computing logic gates
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7803753/
https://www.ncbi.nlm.nih.gov/pubmed/33436729
http://dx.doi.org/10.1038/s41598-020-79891-x
work_keys_str_mv AT barrosmichaeltaynnan engineeringcalciumsignalingofastrocytesforneuralmolecularcomputinglogicgates
AT doanphuong engineeringcalciumsignalingofastrocytesforneuralmolecularcomputinglogicgates
AT kandhavelumeenakshisundaram engineeringcalciumsignalingofastrocytesforneuralmolecularcomputinglogicgates
AT jenningsbrendan engineeringcalciumsignalingofastrocytesforneuralmolecularcomputinglogicgates
AT balasubramaniamsasitharan engineeringcalciumsignalingofastrocytesforneuralmolecularcomputinglogicgates