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Big data and artificial intelligence discover novel drugs targeting proteins without 3D structure and overcome the undruggable targets

The discovery of targeted drugs heavily relies on three-dimensional (3D) structures of target proteins. When the 3D structure of a protein target is unknown, it is very difficult to design its corresponding targeted drugs. Although the 3D structures of some proteins (the so-called undruggable target...

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Autores principales: He, Huiqin, Liu, Benquan, Luo, Hongyi, Zhang, Tingting, Jiang, Jingwei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BMJ Publishing Group 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7804061/
https://www.ncbi.nlm.nih.gov/pubmed/33376199
http://dx.doi.org/10.1136/svn-2019-000323
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author He, Huiqin
Liu, Benquan
Luo, Hongyi
Zhang, Tingting
Jiang, Jingwei
author_facet He, Huiqin
Liu, Benquan
Luo, Hongyi
Zhang, Tingting
Jiang, Jingwei
author_sort He, Huiqin
collection PubMed
description The discovery of targeted drugs heavily relies on three-dimensional (3D) structures of target proteins. When the 3D structure of a protein target is unknown, it is very difficult to design its corresponding targeted drugs. Although the 3D structures of some proteins (the so-called undruggable targets) are known, their targeted drugs are still absent. As increasing crystal/cryogenic electron microscopy structures are deposited in Protein Data Bank, it is much more possible to discover the targeted drugs. Moreover, it is also highly probable to turn previous undruggable targets into druggable ones when we identify their hidden allosteric sites. In this review, we focus on the currently available advanced methods for the discovery of novel compounds targeting proteins without 3D structure and how to turn undruggable targets into druggable ones.
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spelling pubmed-78040612021-01-19 Big data and artificial intelligence discover novel drugs targeting proteins without 3D structure and overcome the undruggable targets He, Huiqin Liu, Benquan Luo, Hongyi Zhang, Tingting Jiang, Jingwei Stroke Vasc Neurol Review The discovery of targeted drugs heavily relies on three-dimensional (3D) structures of target proteins. When the 3D structure of a protein target is unknown, it is very difficult to design its corresponding targeted drugs. Although the 3D structures of some proteins (the so-called undruggable targets) are known, their targeted drugs are still absent. As increasing crystal/cryogenic electron microscopy structures are deposited in Protein Data Bank, it is much more possible to discover the targeted drugs. Moreover, it is also highly probable to turn previous undruggable targets into druggable ones when we identify their hidden allosteric sites. In this review, we focus on the currently available advanced methods for the discovery of novel compounds targeting proteins without 3D structure and how to turn undruggable targets into druggable ones. BMJ Publishing Group 2020-03-29 /pmc/articles/PMC7804061/ /pubmed/33376199 http://dx.doi.org/10.1136/svn-2019-000323 Text en © Author(s) (or their employer(s)) 2020. Re-use permitted under CC BY-NC. No commercial re-use. See rights and permissions. Published by BMJ. http://creativecommons.org/licenses/by-nc/4.0/ http://creativecommons.org/licenses/by-nc/4.0/This is an open access article distributed in accordance with the Creative Commons Attribution Non Commercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited, appropriate credit is given, any changes made indicated, and the use is non-commercial. See: http://creativecommons.org/licenses/by-nc/4.0/.
spellingShingle Review
He, Huiqin
Liu, Benquan
Luo, Hongyi
Zhang, Tingting
Jiang, Jingwei
Big data and artificial intelligence discover novel drugs targeting proteins without 3D structure and overcome the undruggable targets
title Big data and artificial intelligence discover novel drugs targeting proteins without 3D structure and overcome the undruggable targets
title_full Big data and artificial intelligence discover novel drugs targeting proteins without 3D structure and overcome the undruggable targets
title_fullStr Big data and artificial intelligence discover novel drugs targeting proteins without 3D structure and overcome the undruggable targets
title_full_unstemmed Big data and artificial intelligence discover novel drugs targeting proteins without 3D structure and overcome the undruggable targets
title_short Big data and artificial intelligence discover novel drugs targeting proteins without 3D structure and overcome the undruggable targets
title_sort big data and artificial intelligence discover novel drugs targeting proteins without 3d structure and overcome the undruggable targets
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7804061/
https://www.ncbi.nlm.nih.gov/pubmed/33376199
http://dx.doi.org/10.1136/svn-2019-000323
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