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Predicting Age From Optical Coherence Tomography Scans With Deep Learning

PURPOSE: To assess whether age can be predicted from deep learning analysis of peripapillary spectral-domain optical coherence tomography (SD-OCT) B-scans and to determine the importance of specific retinal areas on the predictions. METHODS: Deep learning (DL) convolutional neural networks were deve...

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Autores principales: Shigueoka, Leonardo S., Mariottoni, Eduardo B., Thompson, Atalie C., Jammal, Alessandro A., Costa, Vital P., Medeiros, Felipe A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Association for Research in Vision and Ophthalmology 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7804495/
https://www.ncbi.nlm.nih.gov/pubmed/33510951
http://dx.doi.org/10.1167/tvst.10.1.12
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author Shigueoka, Leonardo S.
Mariottoni, Eduardo B.
Thompson, Atalie C.
Jammal, Alessandro A.
Costa, Vital P.
Medeiros, Felipe A.
author_facet Shigueoka, Leonardo S.
Mariottoni, Eduardo B.
Thompson, Atalie C.
Jammal, Alessandro A.
Costa, Vital P.
Medeiros, Felipe A.
author_sort Shigueoka, Leonardo S.
collection PubMed
description PURPOSE: To assess whether age can be predicted from deep learning analysis of peripapillary spectral-domain optical coherence tomography (SD-OCT) B-scans and to determine the importance of specific retinal areas on the predictions. METHODS: Deep learning (DL) convolutional neural networks were developed to predict chronological age in healthy subjects using peripapillary SD-OCT B-scan images. Models were built using the whole B-scan, as well as using specific regions through image ablation. Cross-validation was used for training and testing the model. Mean absolute error (MAE) and correlations between predicted and observed age were used to evaluate model performance. RESULTS: A total of 7271 images from 542 eyes of 278 healthy subjects were included. DL predictions of age using the whole B-scan were strongly correlated with chronological age (MAE = 5.82 years; r = 0.860, P < 0.001). The model also accurately discriminated between the lowest and highest tertiles of age, with an area under the receiver operating characteristic curve of 0.962. In general, class activation maps tended to show a diffuse pattern of activation throughout the scan image. For specific structures of the B-scan, the layers with the strongest correlations with chronological age were the choroid and vitreous (both r = 0.736), whereas retinal nerve fiber layer had the lowest correlation (r = 0.492). CONCLUSIONS: A DL algorithm was able to accurately predict age from whole peripapillary SD-OCT B-scans. TRANSLATIONAL RELEVANCE: DL models applied to SD-OCT scans suggest that aging appears to affect several layers in the posterior eye segment.
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spelling pubmed-78044952021-01-27 Predicting Age From Optical Coherence Tomography Scans With Deep Learning Shigueoka, Leonardo S. Mariottoni, Eduardo B. Thompson, Atalie C. Jammal, Alessandro A. Costa, Vital P. Medeiros, Felipe A. Transl Vis Sci Technol Article PURPOSE: To assess whether age can be predicted from deep learning analysis of peripapillary spectral-domain optical coherence tomography (SD-OCT) B-scans and to determine the importance of specific retinal areas on the predictions. METHODS: Deep learning (DL) convolutional neural networks were developed to predict chronological age in healthy subjects using peripapillary SD-OCT B-scan images. Models were built using the whole B-scan, as well as using specific regions through image ablation. Cross-validation was used for training and testing the model. Mean absolute error (MAE) and correlations between predicted and observed age were used to evaluate model performance. RESULTS: A total of 7271 images from 542 eyes of 278 healthy subjects were included. DL predictions of age using the whole B-scan were strongly correlated with chronological age (MAE = 5.82 years; r = 0.860, P < 0.001). The model also accurately discriminated between the lowest and highest tertiles of age, with an area under the receiver operating characteristic curve of 0.962. In general, class activation maps tended to show a diffuse pattern of activation throughout the scan image. For specific structures of the B-scan, the layers with the strongest correlations with chronological age were the choroid and vitreous (both r = 0.736), whereas retinal nerve fiber layer had the lowest correlation (r = 0.492). CONCLUSIONS: A DL algorithm was able to accurately predict age from whole peripapillary SD-OCT B-scans. TRANSLATIONAL RELEVANCE: DL models applied to SD-OCT scans suggest that aging appears to affect several layers in the posterior eye segment. The Association for Research in Vision and Ophthalmology 2021-01-07 /pmc/articles/PMC7804495/ /pubmed/33510951 http://dx.doi.org/10.1167/tvst.10.1.12 Text en Copyright 2021 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.
spellingShingle Article
Shigueoka, Leonardo S.
Mariottoni, Eduardo B.
Thompson, Atalie C.
Jammal, Alessandro A.
Costa, Vital P.
Medeiros, Felipe A.
Predicting Age From Optical Coherence Tomography Scans With Deep Learning
title Predicting Age From Optical Coherence Tomography Scans With Deep Learning
title_full Predicting Age From Optical Coherence Tomography Scans With Deep Learning
title_fullStr Predicting Age From Optical Coherence Tomography Scans With Deep Learning
title_full_unstemmed Predicting Age From Optical Coherence Tomography Scans With Deep Learning
title_short Predicting Age From Optical Coherence Tomography Scans With Deep Learning
title_sort predicting age from optical coherence tomography scans with deep learning
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7804495/
https://www.ncbi.nlm.nih.gov/pubmed/33510951
http://dx.doi.org/10.1167/tvst.10.1.12
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