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Personalized treatment options for chronic diseases using precision cohort analytics

To support point-of-care decision making by presenting outcomes of past treatment choices for cohorts of similar patients based on observational data from electronic health records (EHRs), a machine-learning precision cohort treatment option (PCTO) workflow consisting of (1) data extraction, (2) sim...

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Autores principales: Ng, Kenney, Kartoun, Uri, Stavropoulos, Harry, Zambrano, John A., Tang, Paul C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7806725/
https://www.ncbi.nlm.nih.gov/pubmed/33441956
http://dx.doi.org/10.1038/s41598-021-80967-5
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author Ng, Kenney
Kartoun, Uri
Stavropoulos, Harry
Zambrano, John A.
Tang, Paul C.
author_facet Ng, Kenney
Kartoun, Uri
Stavropoulos, Harry
Zambrano, John A.
Tang, Paul C.
author_sort Ng, Kenney
collection PubMed
description To support point-of-care decision making by presenting outcomes of past treatment choices for cohorts of similar patients based on observational data from electronic health records (EHRs), a machine-learning precision cohort treatment option (PCTO) workflow consisting of (1) data extraction, (2) similarity model training, (3) precision cohort identification, and (4) treatment options analysis was developed. The similarity model is used to dynamically create a cohort of similar patients, to inform clinical decisions about an individual patient. The workflow was implemented using EHR data from a large health care provider for three different highly prevalent chronic diseases: hypertension (HTN), type 2 diabetes mellitus (T2DM), and hyperlipidemia (HL). A retrospective analysis demonstrated that treatment options with better outcomes were available for a majority of cases (75%, 74%, 85% for HTN, T2DM, HL, respectively). The models for HTN and T2DM were deployed in a pilot study with primary care physicians using it during clinic visits. A novel data-analytic workflow was developed to create patient-similarity models that dynamically generate personalized treatment insights at the point-of-care. By leveraging both knowledge-driven treatment guidelines and data-driven EHR data, physicians can incorporate real-world evidence in their medical decision-making process when considering treatment options for individual patients.
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spelling pubmed-78067252021-01-14 Personalized treatment options for chronic diseases using precision cohort analytics Ng, Kenney Kartoun, Uri Stavropoulos, Harry Zambrano, John A. Tang, Paul C. Sci Rep Article To support point-of-care decision making by presenting outcomes of past treatment choices for cohorts of similar patients based on observational data from electronic health records (EHRs), a machine-learning precision cohort treatment option (PCTO) workflow consisting of (1) data extraction, (2) similarity model training, (3) precision cohort identification, and (4) treatment options analysis was developed. The similarity model is used to dynamically create a cohort of similar patients, to inform clinical decisions about an individual patient. The workflow was implemented using EHR data from a large health care provider for three different highly prevalent chronic diseases: hypertension (HTN), type 2 diabetes mellitus (T2DM), and hyperlipidemia (HL). A retrospective analysis demonstrated that treatment options with better outcomes were available for a majority of cases (75%, 74%, 85% for HTN, T2DM, HL, respectively). The models for HTN and T2DM were deployed in a pilot study with primary care physicians using it during clinic visits. A novel data-analytic workflow was developed to create patient-similarity models that dynamically generate personalized treatment insights at the point-of-care. By leveraging both knowledge-driven treatment guidelines and data-driven EHR data, physicians can incorporate real-world evidence in their medical decision-making process when considering treatment options for individual patients. Nature Publishing Group UK 2021-01-13 /pmc/articles/PMC7806725/ /pubmed/33441956 http://dx.doi.org/10.1038/s41598-021-80967-5 Text en © The Author(s) 2021 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Ng, Kenney
Kartoun, Uri
Stavropoulos, Harry
Zambrano, John A.
Tang, Paul C.
Personalized treatment options for chronic diseases using precision cohort analytics
title Personalized treatment options for chronic diseases using precision cohort analytics
title_full Personalized treatment options for chronic diseases using precision cohort analytics
title_fullStr Personalized treatment options for chronic diseases using precision cohort analytics
title_full_unstemmed Personalized treatment options for chronic diseases using precision cohort analytics
title_short Personalized treatment options for chronic diseases using precision cohort analytics
title_sort personalized treatment options for chronic diseases using precision cohort analytics
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7806725/
https://www.ncbi.nlm.nih.gov/pubmed/33441956
http://dx.doi.org/10.1038/s41598-021-80967-5
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