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Genetic diversity associated with natural rubber quality in elite genotypes of the rubber tree

The objective of this study was to evaluate the genetic variability of natural rubber latex traits among 44 elite genotypes of the rubber tree [Hevea brasiliensis (Willd. ex Adr. de Juss.) Müell. Arg.]. Multivariate analysis and machine learning techniques were used, targeting the selection of paren...

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Autores principales: Sant’Anna, Isabela de Castro, Gouvêa, Ligia Regina Lima, Martins, Maria Alice, Scaloppi Junior, Erivaldo José, de Freitas, Rogério Soares, Gonçalves, Paulo de Souza
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7806855/
https://www.ncbi.nlm.nih.gov/pubmed/33441718
http://dx.doi.org/10.1038/s41598-020-80110-w
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author Sant’Anna, Isabela de Castro
Gouvêa, Ligia Regina Lima
Martins, Maria Alice
Scaloppi Junior, Erivaldo José
de Freitas, Rogério Soares
Gonçalves, Paulo de Souza
author_facet Sant’Anna, Isabela de Castro
Gouvêa, Ligia Regina Lima
Martins, Maria Alice
Scaloppi Junior, Erivaldo José
de Freitas, Rogério Soares
Gonçalves, Paulo de Souza
author_sort Sant’Anna, Isabela de Castro
collection PubMed
description The objective of this study was to evaluate the genetic variability of natural rubber latex traits among 44 elite genotypes of the rubber tree [Hevea brasiliensis (Willd. ex Adr. de Juss.) Müell. Arg.]. Multivariate analysis and machine learning techniques were used, targeting the selection of parents that demonstrate superior characters. We analyzed traits related to technological or physicochemical properties of natural rubber latex, such as Wallace plasticity (P(0)), the plasticity retention index [PRI (%)], Mooney viscosity (V(R)), ash percentage (Ash), acetone extract percentage (AE), and nitrogen percentage (N), to study genetic diversity. Multivariate [unweighted pair group method with arithmetic means (UPGMA) and Tocher)] and machine learning techniques [K-means and Kohonen’s self-organizing maps (SOMs)] were employed. The genotypes showed high genetic variability for some of the evaluated traits. The traits PRI, Ash, and P(O) contributed the most to genetic diversity. The genotypes were classified into six clusters by the UPGMA method, and the results were consistent with the Tocher, K-means and SOM results. PRI can be used to improve the industrial potential of clones. The clones IAC 418 and PB 326 were the most divergent, followed by IAC 404 and IAC 56. These genotypes and others from the IAC 500 and 400 series could be used to start a breeding program. These combinations offer greater heterotic potential than the others, which can be used to improve components of rubber latex quality. Thus, it is important to consider the quality of rubber latex in the early stage of breeding programs.
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spelling pubmed-78068552021-01-14 Genetic diversity associated with natural rubber quality in elite genotypes of the rubber tree Sant’Anna, Isabela de Castro Gouvêa, Ligia Regina Lima Martins, Maria Alice Scaloppi Junior, Erivaldo José de Freitas, Rogério Soares Gonçalves, Paulo de Souza Sci Rep Article The objective of this study was to evaluate the genetic variability of natural rubber latex traits among 44 elite genotypes of the rubber tree [Hevea brasiliensis (Willd. ex Adr. de Juss.) Müell. Arg.]. Multivariate analysis and machine learning techniques were used, targeting the selection of parents that demonstrate superior characters. We analyzed traits related to technological or physicochemical properties of natural rubber latex, such as Wallace plasticity (P(0)), the plasticity retention index [PRI (%)], Mooney viscosity (V(R)), ash percentage (Ash), acetone extract percentage (AE), and nitrogen percentage (N), to study genetic diversity. Multivariate [unweighted pair group method with arithmetic means (UPGMA) and Tocher)] and machine learning techniques [K-means and Kohonen’s self-organizing maps (SOMs)] were employed. The genotypes showed high genetic variability for some of the evaluated traits. The traits PRI, Ash, and P(O) contributed the most to genetic diversity. The genotypes were classified into six clusters by the UPGMA method, and the results were consistent with the Tocher, K-means and SOM results. PRI can be used to improve the industrial potential of clones. The clones IAC 418 and PB 326 were the most divergent, followed by IAC 404 and IAC 56. These genotypes and others from the IAC 500 and 400 series could be used to start a breeding program. These combinations offer greater heterotic potential than the others, which can be used to improve components of rubber latex quality. Thus, it is important to consider the quality of rubber latex in the early stage of breeding programs. Nature Publishing Group UK 2021-01-13 /pmc/articles/PMC7806855/ /pubmed/33441718 http://dx.doi.org/10.1038/s41598-020-80110-w Text en © The Author(s) 2021 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Sant’Anna, Isabela de Castro
Gouvêa, Ligia Regina Lima
Martins, Maria Alice
Scaloppi Junior, Erivaldo José
de Freitas, Rogério Soares
Gonçalves, Paulo de Souza
Genetic diversity associated with natural rubber quality in elite genotypes of the rubber tree
title Genetic diversity associated with natural rubber quality in elite genotypes of the rubber tree
title_full Genetic diversity associated with natural rubber quality in elite genotypes of the rubber tree
title_fullStr Genetic diversity associated with natural rubber quality in elite genotypes of the rubber tree
title_full_unstemmed Genetic diversity associated with natural rubber quality in elite genotypes of the rubber tree
title_short Genetic diversity associated with natural rubber quality in elite genotypes of the rubber tree
title_sort genetic diversity associated with natural rubber quality in elite genotypes of the rubber tree
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7806855/
https://www.ncbi.nlm.nih.gov/pubmed/33441718
http://dx.doi.org/10.1038/s41598-020-80110-w
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