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A Plate Based Assay for Determination of the Median Lethal Dose of 1-Hydroxyphenazine in Caenorhabditis elegans
Caenorhabditis elegans is an ideal model organism for studying the xenobiotic detoxification pathways of various natural and synthetic toxins. We developed a new workflow to study the effects of 1-hydroxyphenazine (1-HP), a toxin produced by the bacterium Pseudomonas aeruginosa, on the survival of C...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Caltech Library
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7807258/ https://www.ncbi.nlm.nih.gov/pubmed/33458604 http://dx.doi.org/10.17912/micropub.biology.000352 |
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author | Asif, Muhammad Zaka Van der Gaag, Victoria L. Guo, Jane Nocilla, Kelsey A. Muzio, Cole J. Edison, Arthur S. |
author_facet | Asif, Muhammad Zaka Van der Gaag, Victoria L. Guo, Jane Nocilla, Kelsey A. Muzio, Cole J. Edison, Arthur S. |
author_sort | Asif, Muhammad Zaka |
collection | PubMed |
description | Caenorhabditis elegans is an ideal model organism for studying the xenobiotic detoxification pathways of various natural and synthetic toxins. We developed a new workflow to study the effects of 1-hydroxyphenazine (1-HP), a toxin produced by the bacterium Pseudomonas aeruginosa, on the survival of C. elegans. Prior research has demonstrated that C. elegans can detoxify 1-HP through the general mechanism of O-glycosylation. As part of the Vertically Integrated Projects (VIP) undergraduate research team, we have developed a workflow for a plate-based toxicity assay to determine the median lethal dose (LD50) of 1-HP. This was achieved through a toxin exposure method in which the worms were exposed to varying concentrations of 1-HP. The death rates were measured using a fluorescent bead assay. This workflow can be used to test C. elegans responses to different toxins and also the response of different mutant strains to a toxin of interest. |
format | Online Article Text |
id | pubmed-7807258 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Caltech Library |
record_format | MEDLINE/PubMed |
spelling | pubmed-78072582021-01-15 A Plate Based Assay for Determination of the Median Lethal Dose of 1-Hydroxyphenazine in Caenorhabditis elegans Asif, Muhammad Zaka Van der Gaag, Victoria L. Guo, Jane Nocilla, Kelsey A. Muzio, Cole J. Edison, Arthur S. MicroPubl Biol New Finding Caenorhabditis elegans is an ideal model organism for studying the xenobiotic detoxification pathways of various natural and synthetic toxins. We developed a new workflow to study the effects of 1-hydroxyphenazine (1-HP), a toxin produced by the bacterium Pseudomonas aeruginosa, on the survival of C. elegans. Prior research has demonstrated that C. elegans can detoxify 1-HP through the general mechanism of O-glycosylation. As part of the Vertically Integrated Projects (VIP) undergraduate research team, we have developed a workflow for a plate-based toxicity assay to determine the median lethal dose (LD50) of 1-HP. This was achieved through a toxin exposure method in which the worms were exposed to varying concentrations of 1-HP. The death rates were measured using a fluorescent bead assay. This workflow can be used to test C. elegans responses to different toxins and also the response of different mutant strains to a toxin of interest. Caltech Library 2021-01-13 /pmc/articles/PMC7807258/ /pubmed/33458604 http://dx.doi.org/10.17912/micropub.biology.000352 Text en Copyright: © 2021 by the authors https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | New Finding Asif, Muhammad Zaka Van der Gaag, Victoria L. Guo, Jane Nocilla, Kelsey A. Muzio, Cole J. Edison, Arthur S. A Plate Based Assay for Determination of the Median Lethal Dose of 1-Hydroxyphenazine in Caenorhabditis elegans |
title | A Plate Based Assay for Determination of the Median Lethal Dose of 1-Hydroxyphenazine in Caenorhabditis elegans |
title_full | A Plate Based Assay for Determination of the Median Lethal Dose of 1-Hydroxyphenazine in Caenorhabditis elegans |
title_fullStr | A Plate Based Assay for Determination of the Median Lethal Dose of 1-Hydroxyphenazine in Caenorhabditis elegans |
title_full_unstemmed | A Plate Based Assay for Determination of the Median Lethal Dose of 1-Hydroxyphenazine in Caenorhabditis elegans |
title_short | A Plate Based Assay for Determination of the Median Lethal Dose of 1-Hydroxyphenazine in Caenorhabditis elegans |
title_sort | plate based assay for determination of the median lethal dose of 1-hydroxyphenazine in caenorhabditis elegans |
topic | New Finding |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7807258/ https://www.ncbi.nlm.nih.gov/pubmed/33458604 http://dx.doi.org/10.17912/micropub.biology.000352 |
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