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A Plate Based Assay for Determination of the Median Lethal Dose of 1-Hydroxyphenazine in Caenorhabditis elegans

Caenorhabditis elegans is an ideal model organism for studying the xenobiotic detoxification pathways of various natural and synthetic toxins. We developed a new workflow to study the effects of 1-hydroxyphenazine (1-HP), a toxin produced by the bacterium Pseudomonas aeruginosa, on the survival of C...

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Autores principales: Asif, Muhammad Zaka, Van der Gaag, Victoria L., Guo, Jane, Nocilla, Kelsey A., Muzio, Cole J., Edison, Arthur S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Caltech Library 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7807258/
https://www.ncbi.nlm.nih.gov/pubmed/33458604
http://dx.doi.org/10.17912/micropub.biology.000352
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author Asif, Muhammad Zaka
Van der Gaag, Victoria L.
Guo, Jane
Nocilla, Kelsey A.
Muzio, Cole J.
Edison, Arthur S.
author_facet Asif, Muhammad Zaka
Van der Gaag, Victoria L.
Guo, Jane
Nocilla, Kelsey A.
Muzio, Cole J.
Edison, Arthur S.
author_sort Asif, Muhammad Zaka
collection PubMed
description Caenorhabditis elegans is an ideal model organism for studying the xenobiotic detoxification pathways of various natural and synthetic toxins. We developed a new workflow to study the effects of 1-hydroxyphenazine (1-HP), a toxin produced by the bacterium Pseudomonas aeruginosa, on the survival of C. elegans. Prior research has demonstrated that C. elegans can detoxify 1-HP through the general mechanism of O-glycosylation. As part of the Vertically Integrated Projects (VIP) undergraduate research team, we have developed a workflow for a plate-based toxicity assay to determine the median lethal dose (LD50) of 1-HP. This was achieved through a toxin exposure method in which the worms were exposed to varying concentrations of 1-HP. The death rates were measured using a fluorescent bead assay. This workflow can be used to test C. elegans responses to different toxins and also the response of different mutant strains to a toxin of interest.
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spelling pubmed-78072582021-01-15 A Plate Based Assay for Determination of the Median Lethal Dose of 1-Hydroxyphenazine in Caenorhabditis elegans Asif, Muhammad Zaka Van der Gaag, Victoria L. Guo, Jane Nocilla, Kelsey A. Muzio, Cole J. Edison, Arthur S. MicroPubl Biol New Finding Caenorhabditis elegans is an ideal model organism for studying the xenobiotic detoxification pathways of various natural and synthetic toxins. We developed a new workflow to study the effects of 1-hydroxyphenazine (1-HP), a toxin produced by the bacterium Pseudomonas aeruginosa, on the survival of C. elegans. Prior research has demonstrated that C. elegans can detoxify 1-HP through the general mechanism of O-glycosylation. As part of the Vertically Integrated Projects (VIP) undergraduate research team, we have developed a workflow for a plate-based toxicity assay to determine the median lethal dose (LD50) of 1-HP. This was achieved through a toxin exposure method in which the worms were exposed to varying concentrations of 1-HP. The death rates were measured using a fluorescent bead assay. This workflow can be used to test C. elegans responses to different toxins and also the response of different mutant strains to a toxin of interest. Caltech Library 2021-01-13 /pmc/articles/PMC7807258/ /pubmed/33458604 http://dx.doi.org/10.17912/micropub.biology.000352 Text en Copyright: © 2021 by the authors https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle New Finding
Asif, Muhammad Zaka
Van der Gaag, Victoria L.
Guo, Jane
Nocilla, Kelsey A.
Muzio, Cole J.
Edison, Arthur S.
A Plate Based Assay for Determination of the Median Lethal Dose of 1-Hydroxyphenazine in Caenorhabditis elegans
title A Plate Based Assay for Determination of the Median Lethal Dose of 1-Hydroxyphenazine in Caenorhabditis elegans
title_full A Plate Based Assay for Determination of the Median Lethal Dose of 1-Hydroxyphenazine in Caenorhabditis elegans
title_fullStr A Plate Based Assay for Determination of the Median Lethal Dose of 1-Hydroxyphenazine in Caenorhabditis elegans
title_full_unstemmed A Plate Based Assay for Determination of the Median Lethal Dose of 1-Hydroxyphenazine in Caenorhabditis elegans
title_short A Plate Based Assay for Determination of the Median Lethal Dose of 1-Hydroxyphenazine in Caenorhabditis elegans
title_sort plate based assay for determination of the median lethal dose of 1-hydroxyphenazine in caenorhabditis elegans
topic New Finding
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7807258/
https://www.ncbi.nlm.nih.gov/pubmed/33458604
http://dx.doi.org/10.17912/micropub.biology.000352
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