Cargando…

Clinicopathological and prognostic impact of somatic mutations in Chinese patients with clear cell renal cell carcinoma

BACKGROUND: The study of the genomic landscape of Chinese clear cell renal cell carcinoma (ccRCC) entered its nascence in recent years, and the clinical relevance of individual genes in Chinese ccRCC has not yet been researched. The study aimed to explore the relationships between somatic mutations...

Descripción completa

Detalles Bibliográficos
Autores principales: Bi, Hai, Yin, Jipeng, Zhou, Lang, Wu, Yaqian, Ge, Liyuan, Lu, Min, Liu, Lei, Zhang, Hongxian, Zhao, Yongzhe, Liu, Cheng, Ma, Lulin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: AME Publishing Company 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7807320/
https://www.ncbi.nlm.nih.gov/pubmed/33457247
http://dx.doi.org/10.21037/tau-20-1410
_version_ 1783636716683264000
author Bi, Hai
Yin, Jipeng
Zhou, Lang
Wu, Yaqian
Ge, Liyuan
Lu, Min
Liu, Lei
Zhang, Hongxian
Zhao, Yongzhe
Liu, Cheng
Ma, Lulin
author_facet Bi, Hai
Yin, Jipeng
Zhou, Lang
Wu, Yaqian
Ge, Liyuan
Lu, Min
Liu, Lei
Zhang, Hongxian
Zhao, Yongzhe
Liu, Cheng
Ma, Lulin
author_sort Bi, Hai
collection PubMed
description BACKGROUND: The study of the genomic landscape of Chinese clear cell renal cell carcinoma (ccRCC) entered its nascence in recent years, and the clinical relevance of individual genes in Chinese ccRCC has not yet been researched. The study aimed to explore the relationships between somatic mutations and clinical behaviors in Chinese ccRCC. METHODS: Tumor tissue samples were obtained from 105 Chinese patients with ccRCC and deep sequencing targeting 556 cancer genes was performed. Correlation analysis, receiver operator characteristic (ROC) analysis and survival analysis were carried out using SPSS software. RESULTS: A total of 41 genes were used to investigate the relationship between genes and clinical behaviors. We found that different clinical indices were mutually correlated, and there were 12 genes associated with clinical indices. The Kaplan-Meier curves showed that high Fuhrman grade and metastatic disease at diagnosis were significantly associated with poor prognosis. Mutations in BAP1, PTEN, ERBB2, TP53, CDK8, TSC1, SETD2, or SPEN were significantly associated with poor prognosis, consistent with the results of The Cancer Genome Atlas (TCGA) cohort. Mutation of BTG1 occurred much more frequently in Chinese ccRCC (10.5%) than in the TCGA cohort (0.60%), and it was associated with a better prognosis. CONCLUSIONS: A total of 8 genes (BAP1, PTEN, ERBB2, TP53, CDK8, TSC1, SETD2, and SPEN) were found to be associated with poor prognosis of ccRCC, and a new gene (BTG1) was possibly associated with the good prognosis of Chinese ccRCC.
format Online
Article
Text
id pubmed-7807320
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher AME Publishing Company
record_format MEDLINE/PubMed
spelling pubmed-78073202021-01-15 Clinicopathological and prognostic impact of somatic mutations in Chinese patients with clear cell renal cell carcinoma Bi, Hai Yin, Jipeng Zhou, Lang Wu, Yaqian Ge, Liyuan Lu, Min Liu, Lei Zhang, Hongxian Zhao, Yongzhe Liu, Cheng Ma, Lulin Transl Androl Urol Original Article BACKGROUND: The study of the genomic landscape of Chinese clear cell renal cell carcinoma (ccRCC) entered its nascence in recent years, and the clinical relevance of individual genes in Chinese ccRCC has not yet been researched. The study aimed to explore the relationships between somatic mutations and clinical behaviors in Chinese ccRCC. METHODS: Tumor tissue samples were obtained from 105 Chinese patients with ccRCC and deep sequencing targeting 556 cancer genes was performed. Correlation analysis, receiver operator characteristic (ROC) analysis and survival analysis were carried out using SPSS software. RESULTS: A total of 41 genes were used to investigate the relationship between genes and clinical behaviors. We found that different clinical indices were mutually correlated, and there were 12 genes associated with clinical indices. The Kaplan-Meier curves showed that high Fuhrman grade and metastatic disease at diagnosis were significantly associated with poor prognosis. Mutations in BAP1, PTEN, ERBB2, TP53, CDK8, TSC1, SETD2, or SPEN were significantly associated with poor prognosis, consistent with the results of The Cancer Genome Atlas (TCGA) cohort. Mutation of BTG1 occurred much more frequently in Chinese ccRCC (10.5%) than in the TCGA cohort (0.60%), and it was associated with a better prognosis. CONCLUSIONS: A total of 8 genes (BAP1, PTEN, ERBB2, TP53, CDK8, TSC1, SETD2, and SPEN) were found to be associated with poor prognosis of ccRCC, and a new gene (BTG1) was possibly associated with the good prognosis of Chinese ccRCC. AME Publishing Company 2020-12 /pmc/articles/PMC7807320/ /pubmed/33457247 http://dx.doi.org/10.21037/tau-20-1410 Text en 2020 Translational Andrology and Urology. All rights reserved. https://creativecommons.org/licenses/by-nc-nd/4.0/Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0 (https://creativecommons.org/licenses/by-nc-nd/4.0/) .
spellingShingle Original Article
Bi, Hai
Yin, Jipeng
Zhou, Lang
Wu, Yaqian
Ge, Liyuan
Lu, Min
Liu, Lei
Zhang, Hongxian
Zhao, Yongzhe
Liu, Cheng
Ma, Lulin
Clinicopathological and prognostic impact of somatic mutations in Chinese patients with clear cell renal cell carcinoma
title Clinicopathological and prognostic impact of somatic mutations in Chinese patients with clear cell renal cell carcinoma
title_full Clinicopathological and prognostic impact of somatic mutations in Chinese patients with clear cell renal cell carcinoma
title_fullStr Clinicopathological and prognostic impact of somatic mutations in Chinese patients with clear cell renal cell carcinoma
title_full_unstemmed Clinicopathological and prognostic impact of somatic mutations in Chinese patients with clear cell renal cell carcinoma
title_short Clinicopathological and prognostic impact of somatic mutations in Chinese patients with clear cell renal cell carcinoma
title_sort clinicopathological and prognostic impact of somatic mutations in chinese patients with clear cell renal cell carcinoma
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7807320/
https://www.ncbi.nlm.nih.gov/pubmed/33457247
http://dx.doi.org/10.21037/tau-20-1410
work_keys_str_mv AT bihai clinicopathologicalandprognosticimpactofsomaticmutationsinchinesepatientswithclearcellrenalcellcarcinoma
AT yinjipeng clinicopathologicalandprognosticimpactofsomaticmutationsinchinesepatientswithclearcellrenalcellcarcinoma
AT zhoulang clinicopathologicalandprognosticimpactofsomaticmutationsinchinesepatientswithclearcellrenalcellcarcinoma
AT wuyaqian clinicopathologicalandprognosticimpactofsomaticmutationsinchinesepatientswithclearcellrenalcellcarcinoma
AT geliyuan clinicopathologicalandprognosticimpactofsomaticmutationsinchinesepatientswithclearcellrenalcellcarcinoma
AT lumin clinicopathologicalandprognosticimpactofsomaticmutationsinchinesepatientswithclearcellrenalcellcarcinoma
AT liulei clinicopathologicalandprognosticimpactofsomaticmutationsinchinesepatientswithclearcellrenalcellcarcinoma
AT zhanghongxian clinicopathologicalandprognosticimpactofsomaticmutationsinchinesepatientswithclearcellrenalcellcarcinoma
AT zhaoyongzhe clinicopathologicalandprognosticimpactofsomaticmutationsinchinesepatientswithclearcellrenalcellcarcinoma
AT liucheng clinicopathologicalandprognosticimpactofsomaticmutationsinchinesepatientswithclearcellrenalcellcarcinoma
AT malulin clinicopathologicalandprognosticimpactofsomaticmutationsinchinesepatientswithclearcellrenalcellcarcinoma