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Clinicopathological and prognostic impact of somatic mutations in Chinese patients with clear cell renal cell carcinoma
BACKGROUND: The study of the genomic landscape of Chinese clear cell renal cell carcinoma (ccRCC) entered its nascence in recent years, and the clinical relevance of individual genes in Chinese ccRCC has not yet been researched. The study aimed to explore the relationships between somatic mutations...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
AME Publishing Company
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7807320/ https://www.ncbi.nlm.nih.gov/pubmed/33457247 http://dx.doi.org/10.21037/tau-20-1410 |
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author | Bi, Hai Yin, Jipeng Zhou, Lang Wu, Yaqian Ge, Liyuan Lu, Min Liu, Lei Zhang, Hongxian Zhao, Yongzhe Liu, Cheng Ma, Lulin |
author_facet | Bi, Hai Yin, Jipeng Zhou, Lang Wu, Yaqian Ge, Liyuan Lu, Min Liu, Lei Zhang, Hongxian Zhao, Yongzhe Liu, Cheng Ma, Lulin |
author_sort | Bi, Hai |
collection | PubMed |
description | BACKGROUND: The study of the genomic landscape of Chinese clear cell renal cell carcinoma (ccRCC) entered its nascence in recent years, and the clinical relevance of individual genes in Chinese ccRCC has not yet been researched. The study aimed to explore the relationships between somatic mutations and clinical behaviors in Chinese ccRCC. METHODS: Tumor tissue samples were obtained from 105 Chinese patients with ccRCC and deep sequencing targeting 556 cancer genes was performed. Correlation analysis, receiver operator characteristic (ROC) analysis and survival analysis were carried out using SPSS software. RESULTS: A total of 41 genes were used to investigate the relationship between genes and clinical behaviors. We found that different clinical indices were mutually correlated, and there were 12 genes associated with clinical indices. The Kaplan-Meier curves showed that high Fuhrman grade and metastatic disease at diagnosis were significantly associated with poor prognosis. Mutations in BAP1, PTEN, ERBB2, TP53, CDK8, TSC1, SETD2, or SPEN were significantly associated with poor prognosis, consistent with the results of The Cancer Genome Atlas (TCGA) cohort. Mutation of BTG1 occurred much more frequently in Chinese ccRCC (10.5%) than in the TCGA cohort (0.60%), and it was associated with a better prognosis. CONCLUSIONS: A total of 8 genes (BAP1, PTEN, ERBB2, TP53, CDK8, TSC1, SETD2, and SPEN) were found to be associated with poor prognosis of ccRCC, and a new gene (BTG1) was possibly associated with the good prognosis of Chinese ccRCC. |
format | Online Article Text |
id | pubmed-7807320 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | AME Publishing Company |
record_format | MEDLINE/PubMed |
spelling | pubmed-78073202021-01-15 Clinicopathological and prognostic impact of somatic mutations in Chinese patients with clear cell renal cell carcinoma Bi, Hai Yin, Jipeng Zhou, Lang Wu, Yaqian Ge, Liyuan Lu, Min Liu, Lei Zhang, Hongxian Zhao, Yongzhe Liu, Cheng Ma, Lulin Transl Androl Urol Original Article BACKGROUND: The study of the genomic landscape of Chinese clear cell renal cell carcinoma (ccRCC) entered its nascence in recent years, and the clinical relevance of individual genes in Chinese ccRCC has not yet been researched. The study aimed to explore the relationships between somatic mutations and clinical behaviors in Chinese ccRCC. METHODS: Tumor tissue samples were obtained from 105 Chinese patients with ccRCC and deep sequencing targeting 556 cancer genes was performed. Correlation analysis, receiver operator characteristic (ROC) analysis and survival analysis were carried out using SPSS software. RESULTS: A total of 41 genes were used to investigate the relationship between genes and clinical behaviors. We found that different clinical indices were mutually correlated, and there were 12 genes associated with clinical indices. The Kaplan-Meier curves showed that high Fuhrman grade and metastatic disease at diagnosis were significantly associated with poor prognosis. Mutations in BAP1, PTEN, ERBB2, TP53, CDK8, TSC1, SETD2, or SPEN were significantly associated with poor prognosis, consistent with the results of The Cancer Genome Atlas (TCGA) cohort. Mutation of BTG1 occurred much more frequently in Chinese ccRCC (10.5%) than in the TCGA cohort (0.60%), and it was associated with a better prognosis. CONCLUSIONS: A total of 8 genes (BAP1, PTEN, ERBB2, TP53, CDK8, TSC1, SETD2, and SPEN) were found to be associated with poor prognosis of ccRCC, and a new gene (BTG1) was possibly associated with the good prognosis of Chinese ccRCC. AME Publishing Company 2020-12 /pmc/articles/PMC7807320/ /pubmed/33457247 http://dx.doi.org/10.21037/tau-20-1410 Text en 2020 Translational Andrology and Urology. All rights reserved. https://creativecommons.org/licenses/by-nc-nd/4.0/Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0 (https://creativecommons.org/licenses/by-nc-nd/4.0/) . |
spellingShingle | Original Article Bi, Hai Yin, Jipeng Zhou, Lang Wu, Yaqian Ge, Liyuan Lu, Min Liu, Lei Zhang, Hongxian Zhao, Yongzhe Liu, Cheng Ma, Lulin Clinicopathological and prognostic impact of somatic mutations in Chinese patients with clear cell renal cell carcinoma |
title | Clinicopathological and prognostic impact of somatic mutations in Chinese patients with clear cell renal cell carcinoma |
title_full | Clinicopathological and prognostic impact of somatic mutations in Chinese patients with clear cell renal cell carcinoma |
title_fullStr | Clinicopathological and prognostic impact of somatic mutations in Chinese patients with clear cell renal cell carcinoma |
title_full_unstemmed | Clinicopathological and prognostic impact of somatic mutations in Chinese patients with clear cell renal cell carcinoma |
title_short | Clinicopathological and prognostic impact of somatic mutations in Chinese patients with clear cell renal cell carcinoma |
title_sort | clinicopathological and prognostic impact of somatic mutations in chinese patients with clear cell renal cell carcinoma |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7807320/ https://www.ncbi.nlm.nih.gov/pubmed/33457247 http://dx.doi.org/10.21037/tau-20-1410 |
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