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Automatic recognition and analysis of metal streak artifacts in head and neck computed tomography for radiomics modeling
BACKGROUND AND PURPOSE: Computed tomography (CT) radiomics of head and neck cancer (HNC) images is susceptible to dental implant artifacts. This work devised and validated an automated algorithm to detect CT metal artifacts and investigate their impact on subsequent radiomics analyses. A new method...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7807651/ https://www.ncbi.nlm.nih.gov/pubmed/33458268 http://dx.doi.org/10.1016/j.phro.2019.05.001 |
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author | Wei, Lise Rosen, Benjamin Vallières, Martin Chotchutipan, Thong Mierzwa, Michelle Eisbruch, Avraham El Naqa, Issam |
author_facet | Wei, Lise Rosen, Benjamin Vallières, Martin Chotchutipan, Thong Mierzwa, Michelle Eisbruch, Avraham El Naqa, Issam |
author_sort | Wei, Lise |
collection | PubMed |
description | BACKGROUND AND PURPOSE: Computed tomography (CT) radiomics of head and neck cancer (HNC) images is susceptible to dental implant artifacts. This work devised and validated an automated algorithm to detect CT metal artifacts and investigate their impact on subsequent radiomics analyses. A new method based on features from total variation, gradient directional distribution, and Hough transform was developed and evaluated. MATERIALS AND METHODS: Two HNC datasets were analyzed: a training set of 131 patients for developing the detection algorithm and a testing set of 220 patients. Seven designated features were extracted from ROIs (regions of interest) and machine learning with random forests was used for building the artifact detection algorithm. Performance was assessed using the area under the receiver operating characteristics curve (AUC). RESULTS: The testing results of artifacts detection yielded a cross-validated AUC of 0.91 (95% CI: 0.89–0.94), and a test AUC of 0.89. External testing validation yielded an accuracy of 0.82. For radiomics model prediction, training with artifacts yielded an AUC of 0.64 (95% CI: 0.63–0.65), while training on images without artifacts improved the AUC to 0.75 (95% CI: 0.74–0.76). This was compared to visual inspection of artifacts (AUC = 0.71 [95% CI: 0.69–0.73]). CONCLUSION: We developed a new method for automated and efficient detection of streak artifacts. We also showed that such streak artifacts in HNC CT images can worsen the performance of radiomics modeling. |
format | Online Article Text |
id | pubmed-7807651 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-78076512021-01-14 Automatic recognition and analysis of metal streak artifacts in head and neck computed tomography for radiomics modeling Wei, Lise Rosen, Benjamin Vallières, Martin Chotchutipan, Thong Mierzwa, Michelle Eisbruch, Avraham El Naqa, Issam Phys Imaging Radiat Oncol Original Research Article BACKGROUND AND PURPOSE: Computed tomography (CT) radiomics of head and neck cancer (HNC) images is susceptible to dental implant artifacts. This work devised and validated an automated algorithm to detect CT metal artifacts and investigate their impact on subsequent radiomics analyses. A new method based on features from total variation, gradient directional distribution, and Hough transform was developed and evaluated. MATERIALS AND METHODS: Two HNC datasets were analyzed: a training set of 131 patients for developing the detection algorithm and a testing set of 220 patients. Seven designated features were extracted from ROIs (regions of interest) and machine learning with random forests was used for building the artifact detection algorithm. Performance was assessed using the area under the receiver operating characteristics curve (AUC). RESULTS: The testing results of artifacts detection yielded a cross-validated AUC of 0.91 (95% CI: 0.89–0.94), and a test AUC of 0.89. External testing validation yielded an accuracy of 0.82. For radiomics model prediction, training with artifacts yielded an AUC of 0.64 (95% CI: 0.63–0.65), while training on images without artifacts improved the AUC to 0.75 (95% CI: 0.74–0.76). This was compared to visual inspection of artifacts (AUC = 0.71 [95% CI: 0.69–0.73]). CONCLUSION: We developed a new method for automated and efficient detection of streak artifacts. We also showed that such streak artifacts in HNC CT images can worsen the performance of radiomics modeling. Elsevier 2019-06-06 /pmc/articles/PMC7807651/ /pubmed/33458268 http://dx.doi.org/10.1016/j.phro.2019.05.001 Text en © 2019 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Original Research Article Wei, Lise Rosen, Benjamin Vallières, Martin Chotchutipan, Thong Mierzwa, Michelle Eisbruch, Avraham El Naqa, Issam Automatic recognition and analysis of metal streak artifacts in head and neck computed tomography for radiomics modeling |
title | Automatic recognition and analysis of metal streak artifacts in head and neck computed tomography for radiomics modeling |
title_full | Automatic recognition and analysis of metal streak artifacts in head and neck computed tomography for radiomics modeling |
title_fullStr | Automatic recognition and analysis of metal streak artifacts in head and neck computed tomography for radiomics modeling |
title_full_unstemmed | Automatic recognition and analysis of metal streak artifacts in head and neck computed tomography for radiomics modeling |
title_short | Automatic recognition and analysis of metal streak artifacts in head and neck computed tomography for radiomics modeling |
title_sort | automatic recognition and analysis of metal streak artifacts in head and neck computed tomography for radiomics modeling |
topic | Original Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7807651/ https://www.ncbi.nlm.nih.gov/pubmed/33458268 http://dx.doi.org/10.1016/j.phro.2019.05.001 |
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