Cargando…
ITRAQ-based quantitative proteomic analysis of Fusarium moniliforme (Fusarium verticillioides) in response to Phloridzin inducers
BACKGROUND: Apple replant disease (ARD) has been reported from all major fruit-growing regions of the world, and is often caused by biotic factors (pathogen fungi) and abiotic factors (phenolic compounds). In order to clarify the proteomic differences of Fusarium moniliforme under the action of phlo...
Autores principales: | , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7807804/ https://www.ncbi.nlm.nih.gov/pubmed/33446211 http://dx.doi.org/10.1186/s12953-021-00170-2 |
_version_ | 1783636821939322880 |
---|---|
author | Zhang, Rong Jiang, Weitao Liu, Xin Duan, Yanan Xiang, Li Wang, Yanfang Jiang, Yuanmao Shen, Xiang Chen, Xuesen Yin, Chengmiao Mao, Zhiquan |
author_facet | Zhang, Rong Jiang, Weitao Liu, Xin Duan, Yanan Xiang, Li Wang, Yanfang Jiang, Yuanmao Shen, Xiang Chen, Xuesen Yin, Chengmiao Mao, Zhiquan |
author_sort | Zhang, Rong |
collection | PubMed |
description | BACKGROUND: Apple replant disease (ARD) has been reported from all major fruit-growing regions of the world, and is often caused by biotic factors (pathogen fungi) and abiotic factors (phenolic compounds). In order to clarify the proteomic differences of Fusarium moniliforme under the action of phloridzin, and to explore the potential mechanism of F. moniliforme as the pathogen of ARD, the role of Fusarium spp. in ARD was further clarified. METHODS: In this paper, the quantitative proteomics method iTRAQ analysis technology was used to analyze the proteomic differences of F. moniliforme before and after phloridzin treatment. The differentially expressed protein was validated by qRT-PCR analysis. RESULTS: A total of 4535 proteins were detected, and 293 proteins were found with more than 1.2 times (P< 0.05) differences. In-depth data analysis revealed that 59 proteins were found with more than 1.5 times (P< 0.05) differences, and most proteins were consistent with the result of qRT-PCR. Differentially expressed proteins were influenced a variety of cellular processes, particularly metabolic processes. Among these metabolic pathways, a total of 8 significantly enriched KEGG pathways were identified with at least 2 affiliated proteins with different abundance in conidia and mycelium. Functional pathway analysis indicated that up-regulated proteins were mainly distributed in amino sugar, nucleotide sugar metabolism, glycolysis/ gluconeogenesis and phagosome pathways. CONCLUSIONS: This study is the first to perform quantitative proteomic investigation by iTRAQ labeling and LC-MS/MS to identify differentially expressed proteins in F. moniliforme under phloridzin conditions. The results confirmed that F. moniliforme presented a unique protein profile that indicated the adaptive mechanisms of this species to phloridzin environments. The results deepened our understanding of the proteome in F. moniliforme in response to phloridzin inducers and provide a basis for further exploration for improving the efficiency of the fungi as biocontrol agents to control ARD. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12953-021-00170-2. |
format | Online Article Text |
id | pubmed-7807804 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-78078042021-01-15 ITRAQ-based quantitative proteomic analysis of Fusarium moniliforme (Fusarium verticillioides) in response to Phloridzin inducers Zhang, Rong Jiang, Weitao Liu, Xin Duan, Yanan Xiang, Li Wang, Yanfang Jiang, Yuanmao Shen, Xiang Chen, Xuesen Yin, Chengmiao Mao, Zhiquan Proteome Sci Research BACKGROUND: Apple replant disease (ARD) has been reported from all major fruit-growing regions of the world, and is often caused by biotic factors (pathogen fungi) and abiotic factors (phenolic compounds). In order to clarify the proteomic differences of Fusarium moniliforme under the action of phloridzin, and to explore the potential mechanism of F. moniliforme as the pathogen of ARD, the role of Fusarium spp. in ARD was further clarified. METHODS: In this paper, the quantitative proteomics method iTRAQ analysis technology was used to analyze the proteomic differences of F. moniliforme before and after phloridzin treatment. The differentially expressed protein was validated by qRT-PCR analysis. RESULTS: A total of 4535 proteins were detected, and 293 proteins were found with more than 1.2 times (P< 0.05) differences. In-depth data analysis revealed that 59 proteins were found with more than 1.5 times (P< 0.05) differences, and most proteins were consistent with the result of qRT-PCR. Differentially expressed proteins were influenced a variety of cellular processes, particularly metabolic processes. Among these metabolic pathways, a total of 8 significantly enriched KEGG pathways were identified with at least 2 affiliated proteins with different abundance in conidia and mycelium. Functional pathway analysis indicated that up-regulated proteins were mainly distributed in amino sugar, nucleotide sugar metabolism, glycolysis/ gluconeogenesis and phagosome pathways. CONCLUSIONS: This study is the first to perform quantitative proteomic investigation by iTRAQ labeling and LC-MS/MS to identify differentially expressed proteins in F. moniliforme under phloridzin conditions. The results confirmed that F. moniliforme presented a unique protein profile that indicated the adaptive mechanisms of this species to phloridzin environments. The results deepened our understanding of the proteome in F. moniliforme in response to phloridzin inducers and provide a basis for further exploration for improving the efficiency of the fungi as biocontrol agents to control ARD. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12953-021-00170-2. BioMed Central 2021-01-14 /pmc/articles/PMC7807804/ /pubmed/33446211 http://dx.doi.org/10.1186/s12953-021-00170-2 Text en © The Author(s) 2021 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Zhang, Rong Jiang, Weitao Liu, Xin Duan, Yanan Xiang, Li Wang, Yanfang Jiang, Yuanmao Shen, Xiang Chen, Xuesen Yin, Chengmiao Mao, Zhiquan ITRAQ-based quantitative proteomic analysis of Fusarium moniliforme (Fusarium verticillioides) in response to Phloridzin inducers |
title | ITRAQ-based quantitative proteomic analysis of Fusarium moniliforme (Fusarium verticillioides) in response to Phloridzin inducers |
title_full | ITRAQ-based quantitative proteomic analysis of Fusarium moniliforme (Fusarium verticillioides) in response to Phloridzin inducers |
title_fullStr | ITRAQ-based quantitative proteomic analysis of Fusarium moniliforme (Fusarium verticillioides) in response to Phloridzin inducers |
title_full_unstemmed | ITRAQ-based quantitative proteomic analysis of Fusarium moniliforme (Fusarium verticillioides) in response to Phloridzin inducers |
title_short | ITRAQ-based quantitative proteomic analysis of Fusarium moniliforme (Fusarium verticillioides) in response to Phloridzin inducers |
title_sort | itraq-based quantitative proteomic analysis of fusarium moniliforme (fusarium verticillioides) in response to phloridzin inducers |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7807804/ https://www.ncbi.nlm.nih.gov/pubmed/33446211 http://dx.doi.org/10.1186/s12953-021-00170-2 |
work_keys_str_mv | AT zhangrong itraqbasedquantitativeproteomicanalysisoffusariummoniliformefusariumverticillioidesinresponsetophloridzininducers AT jiangweitao itraqbasedquantitativeproteomicanalysisoffusariummoniliformefusariumverticillioidesinresponsetophloridzininducers AT liuxin itraqbasedquantitativeproteomicanalysisoffusariummoniliformefusariumverticillioidesinresponsetophloridzininducers AT duanyanan itraqbasedquantitativeproteomicanalysisoffusariummoniliformefusariumverticillioidesinresponsetophloridzininducers AT xiangli itraqbasedquantitativeproteomicanalysisoffusariummoniliformefusariumverticillioidesinresponsetophloridzininducers AT wangyanfang itraqbasedquantitativeproteomicanalysisoffusariummoniliformefusariumverticillioidesinresponsetophloridzininducers AT jiangyuanmao itraqbasedquantitativeproteomicanalysisoffusariummoniliformefusariumverticillioidesinresponsetophloridzininducers AT shenxiang itraqbasedquantitativeproteomicanalysisoffusariummoniliformefusariumverticillioidesinresponsetophloridzininducers AT chenxuesen itraqbasedquantitativeproteomicanalysisoffusariummoniliformefusariumverticillioidesinresponsetophloridzininducers AT yinchengmiao itraqbasedquantitativeproteomicanalysisoffusariummoniliformefusariumverticillioidesinresponsetophloridzininducers AT maozhiquan itraqbasedquantitativeproteomicanalysisoffusariummoniliformefusariumverticillioidesinresponsetophloridzininducers |