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The complete chloroplast genome sequence of the biofuel plant Sacha Inchi, Plukenetia volubilis
Sacha Inchi (Plukenetia volubilis) is a potential woody oil seed plant for producing healthy vegetable oil due to high content of α-linolenic acid in its seeds. In this study, we report the structure of the complete chloroplast genome of P. volubilis using high-throughput next-generation sequencing...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7808370/ https://www.ncbi.nlm.nih.gov/pubmed/33521257 http://dx.doi.org/10.1080/23802359.2018.1437816 |
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author | Hu, Xiao-Di Pan, Bang-Zhen Fu, Qiantang Chen, Mao-Sheng Xu, Zeng-Fu |
author_facet | Hu, Xiao-Di Pan, Bang-Zhen Fu, Qiantang Chen, Mao-Sheng Xu, Zeng-Fu |
author_sort | Hu, Xiao-Di |
collection | PubMed |
description | Sacha Inchi (Plukenetia volubilis) is a potential woody oil seed plant for producing healthy vegetable oil due to high content of α-linolenic acid in its seeds. In this study, we report the structure of the complete chloroplast genome of P. volubilis using high-throughput next-generation sequencing technology. The circular chloroplast genome is 161,733 bp in size, containing a pair of inverted repeat regions (IR) of 27,382 bp each, which were separated by a large single copy region (LSC) of 88,843 bp and a small single copy region (SSC) of 18,126 bp. The chloroplast genome harbors 135 genes, including 92 protein-coding genes, 35 tRNA genes and 8 rRNA genes. Based on the phylogenetic relationships between the chloroplast genome of P. volubilis and those of the other species, P. volubilis is most closely related to castor bean (Ricinus communis). |
format | Online Article Text |
id | pubmed-7808370 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78083702021-01-29 The complete chloroplast genome sequence of the biofuel plant Sacha Inchi, Plukenetia volubilis Hu, Xiao-Di Pan, Bang-Zhen Fu, Qiantang Chen, Mao-Sheng Xu, Zeng-Fu Mitochondrial DNA B Resour Mitogenome Announcement Sacha Inchi (Plukenetia volubilis) is a potential woody oil seed plant for producing healthy vegetable oil due to high content of α-linolenic acid in its seeds. In this study, we report the structure of the complete chloroplast genome of P. volubilis using high-throughput next-generation sequencing technology. The circular chloroplast genome is 161,733 bp in size, containing a pair of inverted repeat regions (IR) of 27,382 bp each, which were separated by a large single copy region (LSC) of 88,843 bp and a small single copy region (SSC) of 18,126 bp. The chloroplast genome harbors 135 genes, including 92 protein-coding genes, 35 tRNA genes and 8 rRNA genes. Based on the phylogenetic relationships between the chloroplast genome of P. volubilis and those of the other species, P. volubilis is most closely related to castor bean (Ricinus communis). Taylor & Francis 2018-03-09 /pmc/articles/PMC7808370/ /pubmed/33521257 http://dx.doi.org/10.1080/23802359.2018.1437816 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Hu, Xiao-Di Pan, Bang-Zhen Fu, Qiantang Chen, Mao-Sheng Xu, Zeng-Fu The complete chloroplast genome sequence of the biofuel plant Sacha Inchi, Plukenetia volubilis |
title | The complete chloroplast genome sequence of the biofuel plant Sacha Inchi, Plukenetia volubilis |
title_full | The complete chloroplast genome sequence of the biofuel plant Sacha Inchi, Plukenetia volubilis |
title_fullStr | The complete chloroplast genome sequence of the biofuel plant Sacha Inchi, Plukenetia volubilis |
title_full_unstemmed | The complete chloroplast genome sequence of the biofuel plant Sacha Inchi, Plukenetia volubilis |
title_short | The complete chloroplast genome sequence of the biofuel plant Sacha Inchi, Plukenetia volubilis |
title_sort | complete chloroplast genome sequence of the biofuel plant sacha inchi, plukenetia volubilis |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7808370/ https://www.ncbi.nlm.nih.gov/pubmed/33521257 http://dx.doi.org/10.1080/23802359.2018.1437816 |
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