Cargando…

Source identification of infectious diseases in networks via label ranking

BACKGROUND: Outbreaks of infectious diseases would cause great losses to the human society. Source identification in networks has drawn considerable interest in order to understand and control the infectious disease propagation processes. Unsatisfactory accuracy and high time complexity are major ob...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhou, Jianye, Jiang, Yuewen, Huang, Biqing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7808631/
https://www.ncbi.nlm.nih.gov/pubmed/33444390
http://dx.doi.org/10.1371/journal.pone.0245344
_version_ 1783636941016662016
author Zhou, Jianye
Jiang, Yuewen
Huang, Biqing
author_facet Zhou, Jianye
Jiang, Yuewen
Huang, Biqing
author_sort Zhou, Jianye
collection PubMed
description BACKGROUND: Outbreaks of infectious diseases would cause great losses to the human society. Source identification in networks has drawn considerable interest in order to understand and control the infectious disease propagation processes. Unsatisfactory accuracy and high time complexity are major obstacles to practical applications under various real-world situations for existing source identification algorithms. METHODS: This study attempts to measure the possibility for nodes to become the infection source through label ranking. A unified Label Ranking framework for source identification with complete observation and snapshot is proposed. Firstly, a basic label ranking algorithm with complete observation of the network considering both infected and uninfected nodes is designed. Our inferred infection source node with the highest label ranking tends to have more infected nodes surrounding it, which makes it likely to be in the center of infection subgraph and far from the uninfected frontier. A two-stage algorithm for source identification via semi-supervised learning and label ranking is further proposed to address the source identification issue with snapshot. RESULTS: Extensive experiments are conducted on both synthetic and real-world network datasets. It turns out that the proposed label ranking algorithms are capable of identifying the propagation source under different situations fairly accurately with acceptable computational complexity without knowing the underlying model of infection propagation. CONCLUSIONS: The effectiveness and efficiency of the label ranking algorithms proposed in this study make them be of practical value for infection source identification.
format Online
Article
Text
id pubmed-7808631
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-78086312021-02-02 Source identification of infectious diseases in networks via label ranking Zhou, Jianye Jiang, Yuewen Huang, Biqing PLoS One Research Article BACKGROUND: Outbreaks of infectious diseases would cause great losses to the human society. Source identification in networks has drawn considerable interest in order to understand and control the infectious disease propagation processes. Unsatisfactory accuracy and high time complexity are major obstacles to practical applications under various real-world situations for existing source identification algorithms. METHODS: This study attempts to measure the possibility for nodes to become the infection source through label ranking. A unified Label Ranking framework for source identification with complete observation and snapshot is proposed. Firstly, a basic label ranking algorithm with complete observation of the network considering both infected and uninfected nodes is designed. Our inferred infection source node with the highest label ranking tends to have more infected nodes surrounding it, which makes it likely to be in the center of infection subgraph and far from the uninfected frontier. A two-stage algorithm for source identification via semi-supervised learning and label ranking is further proposed to address the source identification issue with snapshot. RESULTS: Extensive experiments are conducted on both synthetic and real-world network datasets. It turns out that the proposed label ranking algorithms are capable of identifying the propagation source under different situations fairly accurately with acceptable computational complexity without knowing the underlying model of infection propagation. CONCLUSIONS: The effectiveness and efficiency of the label ranking algorithms proposed in this study make them be of practical value for infection source identification. Public Library of Science 2021-01-14 /pmc/articles/PMC7808631/ /pubmed/33444390 http://dx.doi.org/10.1371/journal.pone.0245344 Text en © 2021 Zhou et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Zhou, Jianye
Jiang, Yuewen
Huang, Biqing
Source identification of infectious diseases in networks via label ranking
title Source identification of infectious diseases in networks via label ranking
title_full Source identification of infectious diseases in networks via label ranking
title_fullStr Source identification of infectious diseases in networks via label ranking
title_full_unstemmed Source identification of infectious diseases in networks via label ranking
title_short Source identification of infectious diseases in networks via label ranking
title_sort source identification of infectious diseases in networks via label ranking
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7808631/
https://www.ncbi.nlm.nih.gov/pubmed/33444390
http://dx.doi.org/10.1371/journal.pone.0245344
work_keys_str_mv AT zhoujianye sourceidentificationofinfectiousdiseasesinnetworksvialabelranking
AT jiangyuewen sourceidentificationofinfectiousdiseasesinnetworksvialabelranking
AT huangbiqing sourceidentificationofinfectiousdiseasesinnetworksvialabelranking