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ECOPAMPA: A new tool for automatic fish schools detection and assessment from echo data
Accurate identification of aquatic organisms and their numerical abundance calculation using echo detection techniques remains a great challenge for marine researchers. A software architecture for echo data processing is presented in this article. Within it, it is discussed how to obtain energetic,...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7809380/ https://www.ncbi.nlm.nih.gov/pubmed/33490675 http://dx.doi.org/10.1016/j.heliyon.2021.e05906 |
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author | Villar, Sebastián A. Madirolas, Adrián Cabreira, Ariel G. Rozenfeld, Alejandro Acosta, Gerardo G. |
author_facet | Villar, Sebastián A. Madirolas, Adrián Cabreira, Ariel G. Rozenfeld, Alejandro Acosta, Gerardo G. |
author_sort | Villar, Sebastián A. |
collection | PubMed |
description | Accurate identification of aquatic organisms and their numerical abundance calculation using echo detection techniques remains a great challenge for marine researchers. A software architecture for echo data processing is presented in this article. Within it, it is discussed how to obtain energetic, morphometric and bathymetric fish school descriptors to accurately identify different fish-species. To accomplish this task it was necessary to have a development platform that allowed reading echo data from a particular echosounder, to detect fish aggregations and then to calculate fish school descriptors that would be used for fish-species identification, in an automatic way. This article also describes thoroughly the digital processing algorithms for this automatic detection and classification, as well as the automatic process required for surface and bottom line detection, which is necessary to determine the exploration range. These algorithms are implemented within the ECOPAMPA software, which is the first Argentinean system for marine species identification. Finally, a comparative result over experimental data of ECOPAMPA against Echoview(TM) Software Pty Ltd (formerly Myriax Software Pty Ltd), is carefully examined. |
format | Online Article Text |
id | pubmed-7809380 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-78093802021-01-22 ECOPAMPA: A new tool for automatic fish schools detection and assessment from echo data Villar, Sebastián A. Madirolas, Adrián Cabreira, Ariel G. Rozenfeld, Alejandro Acosta, Gerardo G. Heliyon Research Article Accurate identification of aquatic organisms and their numerical abundance calculation using echo detection techniques remains a great challenge for marine researchers. A software architecture for echo data processing is presented in this article. Within it, it is discussed how to obtain energetic, morphometric and bathymetric fish school descriptors to accurately identify different fish-species. To accomplish this task it was necessary to have a development platform that allowed reading echo data from a particular echosounder, to detect fish aggregations and then to calculate fish school descriptors that would be used for fish-species identification, in an automatic way. This article also describes thoroughly the digital processing algorithms for this automatic detection and classification, as well as the automatic process required for surface and bottom line detection, which is necessary to determine the exploration range. These algorithms are implemented within the ECOPAMPA software, which is the first Argentinean system for marine species identification. Finally, a comparative result over experimental data of ECOPAMPA against Echoview(TM) Software Pty Ltd (formerly Myriax Software Pty Ltd), is carefully examined. Elsevier 2021-01-06 /pmc/articles/PMC7809380/ /pubmed/33490675 http://dx.doi.org/10.1016/j.heliyon.2021.e05906 Text en © 2021 Published by Elsevier Ltd. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Research Article Villar, Sebastián A. Madirolas, Adrián Cabreira, Ariel G. Rozenfeld, Alejandro Acosta, Gerardo G. ECOPAMPA: A new tool for automatic fish schools detection and assessment from echo data |
title | ECOPAMPA: A new tool for automatic fish schools detection and assessment from echo data |
title_full | ECOPAMPA: A new tool for automatic fish schools detection and assessment from echo data |
title_fullStr | ECOPAMPA: A new tool for automatic fish schools detection and assessment from echo data |
title_full_unstemmed | ECOPAMPA: A new tool for automatic fish schools detection and assessment from echo data |
title_short | ECOPAMPA: A new tool for automatic fish schools detection and assessment from echo data |
title_sort | ecopampa: a new tool for automatic fish schools detection and assessment from echo data |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7809380/ https://www.ncbi.nlm.nih.gov/pubmed/33490675 http://dx.doi.org/10.1016/j.heliyon.2021.e05906 |
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