Cargando…

Cryptic transmission of SARS-CoV-2 in Washington state

After its emergence in Wuhan, China, in late November or early December 2019, the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus rapidly spread globally. Genome sequencing of SARS-CoV-2 allows the reconstruction of its transmission history, although this is contingent on sampling...

Descripción completa

Detalles Bibliográficos
Autores principales: Bedford, Trevor, Greninger, Alexander L., Roychoudhury, Pavitra, Starita, Lea M., Famulare, Michael, Huang, Meei-Li, Nalla, Arun, Pepper, Gregory, Reinhardt, Adam, Xie, Hong, Shrestha, Lasata, Nguyen, Truong N., Adler, Amanda, Brandstetter, Elisabeth, Cho, Shari, Giroux, Danielle, Han, Peter D., Fay, Kairsten, Frazar, Chris D., Ilcisin, Misja, Lacombe, Kirsten, Lee, Jover, Kiavand, Anahita, Richardson, Matthew, Sibley, Thomas R., Truong, Melissa, Wolf, Caitlin R., Nickerson, Deborah A., Rieder, Mark J., Englund, Janet A., Hadfield, James, Hodcroft, Emma B., Huddleston, John, Moncla, Louise H., Müller, Nicola F., Neher, Richard A., Deng, Xianding, Gu, Wei, Federman, Scot, Chiu, Charles, Duchin, Jeffrey S., Gautom, Romesh, Melly, Geoff, Hiatt, Brian, Dykema, Philip, Lindquist, Scott, Queen, Krista, Tao, Ying, Uehara, Anna, Tong, Suxiang, MacCannell, Duncan, Armstrong, Gregory L., Baird, Geoffrey S., Chu, Helen Y., Shendure, Jay, Jerome, Keith R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Association for the Advancement of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7810035/
https://www.ncbi.nlm.nih.gov/pubmed/32913002
http://dx.doi.org/10.1126/science.abc0523
_version_ 1783637240575950848
author Bedford, Trevor
Greninger, Alexander L.
Roychoudhury, Pavitra
Starita, Lea M.
Famulare, Michael
Huang, Meei-Li
Nalla, Arun
Pepper, Gregory
Reinhardt, Adam
Xie, Hong
Shrestha, Lasata
Nguyen, Truong N.
Adler, Amanda
Brandstetter, Elisabeth
Cho, Shari
Giroux, Danielle
Han, Peter D.
Fay, Kairsten
Frazar, Chris D.
Ilcisin, Misja
Lacombe, Kirsten
Lee, Jover
Kiavand, Anahita
Richardson, Matthew
Sibley, Thomas R.
Truong, Melissa
Wolf, Caitlin R.
Nickerson, Deborah A.
Rieder, Mark J.
Englund, Janet A.
Hadfield, James
Hodcroft, Emma B.
Huddleston, John
Moncla, Louise H.
Müller, Nicola F.
Neher, Richard A.
Deng, Xianding
Gu, Wei
Federman, Scot
Chiu, Charles
Duchin, Jeffrey S.
Gautom, Romesh
Melly, Geoff
Hiatt, Brian
Dykema, Philip
Lindquist, Scott
Queen, Krista
Tao, Ying
Uehara, Anna
Tong, Suxiang
MacCannell, Duncan
Armstrong, Gregory L.
Baird, Geoffrey S.
Chu, Helen Y.
Shendure, Jay
Jerome, Keith R.
author_facet Bedford, Trevor
Greninger, Alexander L.
Roychoudhury, Pavitra
Starita, Lea M.
Famulare, Michael
Huang, Meei-Li
Nalla, Arun
Pepper, Gregory
Reinhardt, Adam
Xie, Hong
Shrestha, Lasata
Nguyen, Truong N.
Adler, Amanda
Brandstetter, Elisabeth
Cho, Shari
Giroux, Danielle
Han, Peter D.
Fay, Kairsten
Frazar, Chris D.
Ilcisin, Misja
Lacombe, Kirsten
Lee, Jover
Kiavand, Anahita
Richardson, Matthew
Sibley, Thomas R.
Truong, Melissa
Wolf, Caitlin R.
Nickerson, Deborah A.
Rieder, Mark J.
Englund, Janet A.
Hadfield, James
Hodcroft, Emma B.
Huddleston, John
Moncla, Louise H.
Müller, Nicola F.
Neher, Richard A.
Deng, Xianding
Gu, Wei
Federman, Scot
Chiu, Charles
Duchin, Jeffrey S.
Gautom, Romesh
Melly, Geoff
Hiatt, Brian
Dykema, Philip
Lindquist, Scott
Queen, Krista
Tao, Ying
Uehara, Anna
Tong, Suxiang
MacCannell, Duncan
Armstrong, Gregory L.
Baird, Geoffrey S.
Chu, Helen Y.
Shendure, Jay
Jerome, Keith R.
author_sort Bedford, Trevor
collection PubMed
description After its emergence in Wuhan, China, in late November or early December 2019, the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus rapidly spread globally. Genome sequencing of SARS-CoV-2 allows the reconstruction of its transmission history, although this is contingent on sampling. We analyzed 453 SARS-CoV-2 genomes collected between 20 February and 15 March 2020 from infected patients in Washington state in the United States. We find that most SARS-CoV-2 infections sampled during this time derive from a single introduction in late January or early February 2020, which subsequently spread locally before active community surveillance was implemented.
format Online
Article
Text
id pubmed-7810035
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher American Association for the Advancement of Science
record_format MEDLINE/PubMed
spelling pubmed-78100352021-01-19 Cryptic transmission of SARS-CoV-2 in Washington state Bedford, Trevor Greninger, Alexander L. Roychoudhury, Pavitra Starita, Lea M. Famulare, Michael Huang, Meei-Li Nalla, Arun Pepper, Gregory Reinhardt, Adam Xie, Hong Shrestha, Lasata Nguyen, Truong N. Adler, Amanda Brandstetter, Elisabeth Cho, Shari Giroux, Danielle Han, Peter D. Fay, Kairsten Frazar, Chris D. Ilcisin, Misja Lacombe, Kirsten Lee, Jover Kiavand, Anahita Richardson, Matthew Sibley, Thomas R. Truong, Melissa Wolf, Caitlin R. Nickerson, Deborah A. Rieder, Mark J. Englund, Janet A. Hadfield, James Hodcroft, Emma B. Huddleston, John Moncla, Louise H. Müller, Nicola F. Neher, Richard A. Deng, Xianding Gu, Wei Federman, Scot Chiu, Charles Duchin, Jeffrey S. Gautom, Romesh Melly, Geoff Hiatt, Brian Dykema, Philip Lindquist, Scott Queen, Krista Tao, Ying Uehara, Anna Tong, Suxiang MacCannell, Duncan Armstrong, Gregory L. Baird, Geoffrey S. Chu, Helen Y. Shendure, Jay Jerome, Keith R. Science Reports After its emergence in Wuhan, China, in late November or early December 2019, the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus rapidly spread globally. Genome sequencing of SARS-CoV-2 allows the reconstruction of its transmission history, although this is contingent on sampling. We analyzed 453 SARS-CoV-2 genomes collected between 20 February and 15 March 2020 from infected patients in Washington state in the United States. We find that most SARS-CoV-2 infections sampled during this time derive from a single introduction in late January or early February 2020, which subsequently spread locally before active community surveillance was implemented. American Association for the Advancement of Science 2020-10-30 2020-09-10 /pmc/articles/PMC7810035/ /pubmed/32913002 http://dx.doi.org/10.1126/science.abc0523 Text en Copyright © 2020 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works https://creativecommons.org/licenses/by/4.0/ https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution license (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Reports
Bedford, Trevor
Greninger, Alexander L.
Roychoudhury, Pavitra
Starita, Lea M.
Famulare, Michael
Huang, Meei-Li
Nalla, Arun
Pepper, Gregory
Reinhardt, Adam
Xie, Hong
Shrestha, Lasata
Nguyen, Truong N.
Adler, Amanda
Brandstetter, Elisabeth
Cho, Shari
Giroux, Danielle
Han, Peter D.
Fay, Kairsten
Frazar, Chris D.
Ilcisin, Misja
Lacombe, Kirsten
Lee, Jover
Kiavand, Anahita
Richardson, Matthew
Sibley, Thomas R.
Truong, Melissa
Wolf, Caitlin R.
Nickerson, Deborah A.
Rieder, Mark J.
Englund, Janet A.
Hadfield, James
Hodcroft, Emma B.
Huddleston, John
Moncla, Louise H.
Müller, Nicola F.
Neher, Richard A.
Deng, Xianding
Gu, Wei
Federman, Scot
Chiu, Charles
Duchin, Jeffrey S.
Gautom, Romesh
Melly, Geoff
Hiatt, Brian
Dykema, Philip
Lindquist, Scott
Queen, Krista
Tao, Ying
Uehara, Anna
Tong, Suxiang
MacCannell, Duncan
Armstrong, Gregory L.
Baird, Geoffrey S.
Chu, Helen Y.
Shendure, Jay
Jerome, Keith R.
Cryptic transmission of SARS-CoV-2 in Washington state
title Cryptic transmission of SARS-CoV-2 in Washington state
title_full Cryptic transmission of SARS-CoV-2 in Washington state
title_fullStr Cryptic transmission of SARS-CoV-2 in Washington state
title_full_unstemmed Cryptic transmission of SARS-CoV-2 in Washington state
title_short Cryptic transmission of SARS-CoV-2 in Washington state
title_sort cryptic transmission of sars-cov-2 in washington state
topic Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7810035/
https://www.ncbi.nlm.nih.gov/pubmed/32913002
http://dx.doi.org/10.1126/science.abc0523
work_keys_str_mv AT bedfordtrevor cryptictransmissionofsarscov2inwashingtonstate
AT greningeralexanderl cryptictransmissionofsarscov2inwashingtonstate
AT roychoudhurypavitra cryptictransmissionofsarscov2inwashingtonstate
AT staritaleam cryptictransmissionofsarscov2inwashingtonstate
AT famularemichael cryptictransmissionofsarscov2inwashingtonstate
AT huangmeeili cryptictransmissionofsarscov2inwashingtonstate
AT nallaarun cryptictransmissionofsarscov2inwashingtonstate
AT peppergregory cryptictransmissionofsarscov2inwashingtonstate
AT reinhardtadam cryptictransmissionofsarscov2inwashingtonstate
AT xiehong cryptictransmissionofsarscov2inwashingtonstate
AT shresthalasata cryptictransmissionofsarscov2inwashingtonstate
AT nguyentruongn cryptictransmissionofsarscov2inwashingtonstate
AT adleramanda cryptictransmissionofsarscov2inwashingtonstate
AT brandstetterelisabeth cryptictransmissionofsarscov2inwashingtonstate
AT choshari cryptictransmissionofsarscov2inwashingtonstate
AT girouxdanielle cryptictransmissionofsarscov2inwashingtonstate
AT hanpeterd cryptictransmissionofsarscov2inwashingtonstate
AT faykairsten cryptictransmissionofsarscov2inwashingtonstate
AT frazarchrisd cryptictransmissionofsarscov2inwashingtonstate
AT ilcisinmisja cryptictransmissionofsarscov2inwashingtonstate
AT lacombekirsten cryptictransmissionofsarscov2inwashingtonstate
AT leejover cryptictransmissionofsarscov2inwashingtonstate
AT kiavandanahita cryptictransmissionofsarscov2inwashingtonstate
AT richardsonmatthew cryptictransmissionofsarscov2inwashingtonstate
AT sibleythomasr cryptictransmissionofsarscov2inwashingtonstate
AT truongmelissa cryptictransmissionofsarscov2inwashingtonstate
AT wolfcaitlinr cryptictransmissionofsarscov2inwashingtonstate
AT nickersondeboraha cryptictransmissionofsarscov2inwashingtonstate
AT riedermarkj cryptictransmissionofsarscov2inwashingtonstate
AT englundjaneta cryptictransmissionofsarscov2inwashingtonstate
AT cryptictransmissionofsarscov2inwashingtonstate
AT hadfieldjames cryptictransmissionofsarscov2inwashingtonstate
AT hodcroftemmab cryptictransmissionofsarscov2inwashingtonstate
AT huddlestonjohn cryptictransmissionofsarscov2inwashingtonstate
AT monclalouiseh cryptictransmissionofsarscov2inwashingtonstate
AT mullernicolaf cryptictransmissionofsarscov2inwashingtonstate
AT neherricharda cryptictransmissionofsarscov2inwashingtonstate
AT dengxianding cryptictransmissionofsarscov2inwashingtonstate
AT guwei cryptictransmissionofsarscov2inwashingtonstate
AT federmanscot cryptictransmissionofsarscov2inwashingtonstate
AT chiucharles cryptictransmissionofsarscov2inwashingtonstate
AT duchinjeffreys cryptictransmissionofsarscov2inwashingtonstate
AT gautomromesh cryptictransmissionofsarscov2inwashingtonstate
AT mellygeoff cryptictransmissionofsarscov2inwashingtonstate
AT hiattbrian cryptictransmissionofsarscov2inwashingtonstate
AT dykemaphilip cryptictransmissionofsarscov2inwashingtonstate
AT lindquistscott cryptictransmissionofsarscov2inwashingtonstate
AT queenkrista cryptictransmissionofsarscov2inwashingtonstate
AT taoying cryptictransmissionofsarscov2inwashingtonstate
AT ueharaanna cryptictransmissionofsarscov2inwashingtonstate
AT tongsuxiang cryptictransmissionofsarscov2inwashingtonstate
AT maccannellduncan cryptictransmissionofsarscov2inwashingtonstate
AT armstronggregoryl cryptictransmissionofsarscov2inwashingtonstate
AT bairdgeoffreys cryptictransmissionofsarscov2inwashingtonstate
AT chuheleny cryptictransmissionofsarscov2inwashingtonstate
AT shendurejay cryptictransmissionofsarscov2inwashingtonstate
AT jeromekeithr cryptictransmissionofsarscov2inwashingtonstate