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A framework for the risk prediction of avian influenza occurrence: An Indonesian case study

Avian influenza viruses can cause economically devastating diseases in poultry and have the potential for zoonotic transmission. To mitigate the consequences of avian influenza, disease prediction systems have become increasingly important. In this study, we have proposed a framework for the predict...

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Autores principales: Yousefinaghani, Samira, Dara, Rozita, Poljak, Zvonimir, Song, Fei, Sharif, Shayan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7810353/
https://www.ncbi.nlm.nih.gov/pubmed/33449934
http://dx.doi.org/10.1371/journal.pone.0245116
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author Yousefinaghani, Samira
Dara, Rozita
Poljak, Zvonimir
Song, Fei
Sharif, Shayan
author_facet Yousefinaghani, Samira
Dara, Rozita
Poljak, Zvonimir
Song, Fei
Sharif, Shayan
author_sort Yousefinaghani, Samira
collection PubMed
description Avian influenza viruses can cause economically devastating diseases in poultry and have the potential for zoonotic transmission. To mitigate the consequences of avian influenza, disease prediction systems have become increasingly important. In this study, we have proposed a framework for the prediction of the occurrence and spread of avian influenza events in a geographical area. The application of the proposed framework was examined in an Indonesian case study. An extensive list of historical data sources containing disease predictors and target variables was used to build spatiotemporal and transactional datasets. To combine disparate sources, data rows were scaled to a temporal scale of 1-week and a spatial scale of 1-degree × 1-degree cells. Given the constructed datasets, underlying patterns in the form of rules explaining the risk of occurrence and spread of avian influenza were discovered. The created rules were combined and ordered based on their importance and then stored in a knowledge base. The results suggested that the proposed framework could act as a tool to gain a broad understanding of the drivers of avian influenza epidemics and may facilitate the prediction of future disease events.
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spelling pubmed-78103532021-01-27 A framework for the risk prediction of avian influenza occurrence: An Indonesian case study Yousefinaghani, Samira Dara, Rozita Poljak, Zvonimir Song, Fei Sharif, Shayan PLoS One Research Article Avian influenza viruses can cause economically devastating diseases in poultry and have the potential for zoonotic transmission. To mitigate the consequences of avian influenza, disease prediction systems have become increasingly important. In this study, we have proposed a framework for the prediction of the occurrence and spread of avian influenza events in a geographical area. The application of the proposed framework was examined in an Indonesian case study. An extensive list of historical data sources containing disease predictors and target variables was used to build spatiotemporal and transactional datasets. To combine disparate sources, data rows were scaled to a temporal scale of 1-week and a spatial scale of 1-degree × 1-degree cells. Given the constructed datasets, underlying patterns in the form of rules explaining the risk of occurrence and spread of avian influenza were discovered. The created rules were combined and ordered based on their importance and then stored in a knowledge base. The results suggested that the proposed framework could act as a tool to gain a broad understanding of the drivers of avian influenza epidemics and may facilitate the prediction of future disease events. Public Library of Science 2021-01-15 /pmc/articles/PMC7810353/ /pubmed/33449934 http://dx.doi.org/10.1371/journal.pone.0245116 Text en © 2021 Yousefinaghani et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Yousefinaghani, Samira
Dara, Rozita
Poljak, Zvonimir
Song, Fei
Sharif, Shayan
A framework for the risk prediction of avian influenza occurrence: An Indonesian case study
title A framework for the risk prediction of avian influenza occurrence: An Indonesian case study
title_full A framework for the risk prediction of avian influenza occurrence: An Indonesian case study
title_fullStr A framework for the risk prediction of avian influenza occurrence: An Indonesian case study
title_full_unstemmed A framework for the risk prediction of avian influenza occurrence: An Indonesian case study
title_short A framework for the risk prediction of avian influenza occurrence: An Indonesian case study
title_sort framework for the risk prediction of avian influenza occurrence: an indonesian case study
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7810353/
https://www.ncbi.nlm.nih.gov/pubmed/33449934
http://dx.doi.org/10.1371/journal.pone.0245116
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