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Network Pharmacology-Based Prediction of Catalpol and Mechanisms against Stroke
AIM: To apply the network pharmacology method to screen the target of catalpol prevention and treatment of stroke, and explore the pharmacological mechanism of Catalpol prevention and treatment of stroke. METHODS: PharmMapper, GeneCards, DAVID, and other databases were used to find key targets. We s...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7810528/ https://www.ncbi.nlm.nih.gov/pubmed/33505489 http://dx.doi.org/10.1155/2021/2541316 |
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author | Wang, Jinghui Zhang, Meifeng Sun, Si Wan, Guoran Wan, Dong Feng, Shan Zhu, Huifeng |
author_facet | Wang, Jinghui Zhang, Meifeng Sun, Si Wan, Guoran Wan, Dong Feng, Shan Zhu, Huifeng |
author_sort | Wang, Jinghui |
collection | PubMed |
description | AIM: To apply the network pharmacology method to screen the target of catalpol prevention and treatment of stroke, and explore the pharmacological mechanism of Catalpol prevention and treatment of stroke. METHODS: PharmMapper, GeneCards, DAVID, and other databases were used to find key targets. We selected hub protein and catalpol which were screened for molecular docking verification. Based on the results of molecular docking, the ITC was used to determine the binding coefficient between the highest scoring protein and catalpol. The GEO database and ROC curve were used to evaluate the correlation between key targets. RESULTS: 27 key targets were obtained by mapping the predicted catalpol-related targets to the disease. Hub genes (ALB, CASP3, MAPK1 (14), MMP9, ACE, KDR, etc.) were obtained in the key target PPI network. The results of KEGG enrichment analysis showed that its signal pathway was involved in angiogenic remodeling such as VEGF, neurotrophic factors, and inflammation. The results of molecular docking showed that ACE had the highest docking score. Therefore, the ITC was used for the titration of ACE and catalpol. The results showed that catalpol had a strong binding force with ACE. CONCLUSION: Network pharmacology combined with molecular docking predicts key genes, proteins, and signaling pathways for catalpol in treating stroke. The strong binding force between catalpol and ACE was obtained by using ITC, and the results of molecular docking were verified to lay the foundation for further research on the effect of catalpol on ACE. ROC results showed that the AUC values of the key targets are all >0.5. This article uses network pharmacology to provide a reference for a more in-depth study of catalpol's mechanism and experimental design. |
format | Online Article Text |
id | pubmed-7810528 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-78105282021-01-26 Network Pharmacology-Based Prediction of Catalpol and Mechanisms against Stroke Wang, Jinghui Zhang, Meifeng Sun, Si Wan, Guoran Wan, Dong Feng, Shan Zhu, Huifeng Evid Based Complement Alternat Med Research Article AIM: To apply the network pharmacology method to screen the target of catalpol prevention and treatment of stroke, and explore the pharmacological mechanism of Catalpol prevention and treatment of stroke. METHODS: PharmMapper, GeneCards, DAVID, and other databases were used to find key targets. We selected hub protein and catalpol which were screened for molecular docking verification. Based on the results of molecular docking, the ITC was used to determine the binding coefficient between the highest scoring protein and catalpol. The GEO database and ROC curve were used to evaluate the correlation between key targets. RESULTS: 27 key targets were obtained by mapping the predicted catalpol-related targets to the disease. Hub genes (ALB, CASP3, MAPK1 (14), MMP9, ACE, KDR, etc.) were obtained in the key target PPI network. The results of KEGG enrichment analysis showed that its signal pathway was involved in angiogenic remodeling such as VEGF, neurotrophic factors, and inflammation. The results of molecular docking showed that ACE had the highest docking score. Therefore, the ITC was used for the titration of ACE and catalpol. The results showed that catalpol had a strong binding force with ACE. CONCLUSION: Network pharmacology combined with molecular docking predicts key genes, proteins, and signaling pathways for catalpol in treating stroke. The strong binding force between catalpol and ACE was obtained by using ITC, and the results of molecular docking were verified to lay the foundation for further research on the effect of catalpol on ACE. ROC results showed that the AUC values of the key targets are all >0.5. This article uses network pharmacology to provide a reference for a more in-depth study of catalpol's mechanism and experimental design. Hindawi 2021-01-07 /pmc/articles/PMC7810528/ /pubmed/33505489 http://dx.doi.org/10.1155/2021/2541316 Text en Copyright © 2021 Jinghui Wang et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Wang, Jinghui Zhang, Meifeng Sun, Si Wan, Guoran Wan, Dong Feng, Shan Zhu, Huifeng Network Pharmacology-Based Prediction of Catalpol and Mechanisms against Stroke |
title | Network Pharmacology-Based Prediction of Catalpol and Mechanisms against Stroke |
title_full | Network Pharmacology-Based Prediction of Catalpol and Mechanisms against Stroke |
title_fullStr | Network Pharmacology-Based Prediction of Catalpol and Mechanisms against Stroke |
title_full_unstemmed | Network Pharmacology-Based Prediction of Catalpol and Mechanisms against Stroke |
title_short | Network Pharmacology-Based Prediction of Catalpol and Mechanisms against Stroke |
title_sort | network pharmacology-based prediction of catalpol and mechanisms against stroke |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7810528/ https://www.ncbi.nlm.nih.gov/pubmed/33505489 http://dx.doi.org/10.1155/2021/2541316 |
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