Cargando…

Capsid integrity quantitative PCR to determine virus infectivity in environmental and food applications – A systematic review

Capsid integrity quantitative PCR (qPCR), a molecular detection method for infectious viruses combining azo dye pretreatment with qPCR, has been widely used in recent years; however, variations in pretreatment conditions for various virus types can limit the efficacy of specific protocols. By identi...

Descripción completa

Detalles Bibliográficos
Autores principales:	Leifels, Mats, Cheng, Dan, Sozzi, Emanuele, Shoults, David C., Wuertz, Stefan, Mongkolsuk, Skorn, Sirikanchana, Kwanrawee
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Elsevier 2020
Materias:	Full Paper
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7811166/ https://www.ncbi.nlm.nih.gov/pubmed/33490943 http://dx.doi.org/10.1016/j.wroa.2020.100080

Ejemplares similares

PCR data and comparative performance of Bacteroidales microbial source tracking genetic markers
por: Somnark, Pornjira, et al.
Publicado: (2018)

Human Fecal Pollution Monitoring and Microbial Risk Assessment for Water Reuse Potential in a Coastal Industrial–Residential Mixed-Use Watershed
por: Kongprajug, Akechai, et al.
Publicado: (2021)

SARS-CoV-2 RNA surveillance in large to small centralized wastewater treatment plants preceding the third COVID-19 resurgence in Bangkok, Thailand
por: Sangsanont, Jatuwat, et al.
Publicado: (2022)

The one health perspective to improve environmental surveillance of zoonotic viruses: lessons from COVID-19 and outlook beyond
por: Leifels, Mats, et al.
Publicado: (2022)

Wastewater monitoring in tourist cities as potential sentinel sites for near real-time dynamics of imported SARS-CoV-2 variants
por: Sangsanont, Jatuwat, et al.
Publicado: (2023)

Outbreaks of Tilapia Lake Virus Infection, Thailand, 2015–2016
por: Surachetpong, Win, et al.
Publicado: (2017)

Antifungal Potential of Extracellular Metabolites Produced by Streptomyces hygroscopicus against Phytopathogenic Fungi
por: Prapagdee, Benjaphorn, et al.
Publicado: (2008)

Peptoid Efficacy against Polymicrobial Biofilms Determined by Using Propidium Monoazide‐Modified Quantitative PCR
por: Luo, Yu, et al.
Publicado: (2016)

Influence of membrane pore-size on the recovery of endogenous viruses from wastewater using an adsorption-extraction method
por: Ahmed, Warish, et al.
Publicado: (2023)

Nonimmunogenetic Viral Capsid Carrier with Cancer Targeting Activity
por: Lee, Bo‐Ram, et al.
Publicado: (2018)

Agrobacterium tumefaciens estC, Encoding an Enzyme Containing Esterase Activity, Is Regulated by EstR, a Regulator in the MarR Family
por: Rittiroongrad, Surawach, et al.
Publicado: (2016)

Contribution of Stenotrophomonas maltophilia MfsC transporter to protection against diamide and the regulation of its expression by the diamide responsive repressor DitR
por: Boonyakanog, Angkana, et al.
Publicado: (2022)

Pseudomonas aeruginosa IscR-Regulated Ferredoxin NADP(+) Reductase Gene (fprB) Functions in Iron-Sulfur Cluster Biogenesis and Multiple Stress Response
por: Romsang, Adisak, et al.
Publicado: (2015)

Pseudomonas aeruginosa nfuA: Gene regulation and its physiological roles in sustaining growth under stress and anaerobic conditions and maintaining bacterial virulence
por: Romsang, Adisak, et al.
Publicado: (2018)

Transcriptional regulation of the Pseudomonas aeruginosa iron-sulfur cluster assembly pathway by binding of IscR to multiple sites
por: Saninjuk, Kritsakorn, et al.
Publicado: (2019)

Diversity of environmental single-stranded DNA phages revealed by PCR amplification of the partial major capsid protein
por: Hopkins, Max, et al.
Publicado: (2014)

Occurrence of multiple respiratory viruses in wastewater in Queensland, Australia: Potential for community disease surveillance
por: Ahmed, Warish, et al.
Publicado: (2023)

Regulation of Organic Hydroperoxide Stress Response by Two OhrR Homologs in Pseudomonas aeruginosa
por: Atichartpongkul, Sopapan, et al.
Publicado: (2016)

The Iron-Sulphur Cluster Biosynthesis Regulator IscR Contributes to Iron Homeostasis and Resistance to Oxidants in Pseudomonas aeruginosa
por: Romsang, Adisak, et al.
Publicado: (2014)

Over-Expression of Hypochlorite Inducible Major Facilitator Superfamily (MFS) Pumps Reduces Antimicrobial Drug Susceptibility by Increasing the Production of MexXY Mediated by ArmZ in Pseudomonas aeruginosa
por: Dulyayangkul, Punyawee, et al.
Publicado: (2021)

Design and storage stability of reference materials for microfluidic quantitative PCR-based equine gene doping tests
por: TOZAKI, Teruaki, et al.
Publicado: (2021)

In silico Identification of Hypoxic Signature followed by reverse transcription-quantitative PCR Validation in Cancer Cell Lines
por: Shayan, Sara, et al.
Publicado: (2023)

Contextualizing Wastewater-Based surveillance in the COVID-19 vaccination era
por: Armas, Federica, et al.
Publicado: (2023)

Regulation by SoxR of mfsA, Which Encodes a Major Facilitator Protein Involved in Paraquat Resistance in Stenotrophomonas maltophilia
por: Srijaruskul, Kriangsuk, et al.
Publicado: (2015)

Detection of superoxide dismutase (Cu–Zn) isoenzymes in leaves and pseudobulbs of Bulbophyllum morphologlorum Kraenzl orchid by comparative proteomic analysis
por: Huehne, Pattana S., et al.
Publicado: (2020)

Methods for genetic manipulation of Burkholderia gladioli pathovar cocovenenans
por: Somprasong, Nawarat, et al.
Publicado: (2010)

Pseudomonas aeruginosa glutathione biosynthesis genes play multiple roles in stress protection, bacterial virulence and biofilm formation
por: Wongsaroj, Lampet, et al.
Publicado: (2018)

The FinR-regulated essential gene fprA, encoding ferredoxin NADP(+) reductase: Roles in superoxide-mediated stress protection and virulence of Pseudomonas aeruginosa
por: Boonma, Siriwan, et al.
Publicado: (2017)

Sensitive Time-Resolved Fluorescence Immunoassay for Quantitative Determination of Oxyfluorfen in Food and Environmental Samples
por: Sheng, En Ze, et al.
Publicado: (2021)

Genome-Wide Identification of Host Genes Required for Toxicity of Bacterial Cytolethal Distending Toxin in a Yeast Model
por: Denmongkholchai, Siriyod, et al.
Publicado: (2019)

Pseudomonas aeruginosa ttcA encoding tRNA-thiolating protein requires an iron-sulfur cluster to participate in hydrogen peroxide-mediated stress protection and pathogenicity
por: Romsang, Adisak, et al.
Publicado: (2018)

An inexpensive point-of-care immunochromatographic test for Talaromyces marneffei infection based on the yeast phase specific monoclonal antibody 4D1 and Galanthus nivalis agglutinin
por: Pruksaphon, Kritsada, et al.
Publicado: (2021)

Quantitative Analysis of Food and Feed Samples with Droplet Digital PCR
por: Morisset, Dany, et al.
Publicado: (2013)

Piezoelectric Sensor for Determination of Genetically Modified Soybean Roundup Ready(®) in Samples not Amplified by PCR
por: Stobiecka, Magdalena, et al.
Publicado: (2007)

Making waves: Wastewater surveillance of SARS-CoV-2 in an endemic future
por: Wu, Fuqing, et al.
Publicado: (2022)

Viability RT-qPCR to Distinguish Between HEV and HAV With Intact and Altered Capsids
por: Randazzo, Walter, et al.
Publicado: (2018)

Degenerate PCR Targeting the Major Capsid Protein Gene of HcRNAV and Related Viruses
por: Takahashi, Michiko, et al.
Publicado: (2022)

Methods to determine limit of detection and limit of quantification in quantitative real-time PCR (qPCR)
por: Forootan, Amin, et al.
Publicado: (2017)

Revealing the Diversity and Quantity of Peritrich Ciliates in Environmental Samples Using Specific Primer-based PCR and Quantitative PCR
por: Liu, Xihan, et al.
Publicado: (2012)

A Versatile Environmental Impedimetric Sensor for Ultrasensitive Determination of Persistent Organic Pollutants (POPs) and Highly Toxic Inorganic Ions
por: Chen, Xing, et al.
Publicado: (2015)

Cannot write session to /tmp/vufind_sessions/sess_p99rlcokev26eilf6jb1q5pfsk