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High expression of collagen 1A2 promotes the proliferation and metastasis of esophageal cancer cells

BACKGROUND: To undertake a bioinformatics analysis to identify abnormally expressed genes [also referred to as differentially expressed genes (DEGs)] and their functions in esophageal carcinoma (ESCA). METHODS: DEGs (i.e., GSE100942, GSE17351, GSE26886, and GSE77861) were obtained from a gene expres...

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Autores principales: Li, Guangbin, Jiang, Wei, Kang, Yunteng, Yu, Xiaojun, Zhang, Chengpeng, Feng, Yu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: AME Publishing Company 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7812173/
https://www.ncbi.nlm.nih.gov/pubmed/33490184
http://dx.doi.org/10.21037/atm-20-7867
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author Li, Guangbin
Jiang, Wei
Kang, Yunteng
Yu, Xiaojun
Zhang, Chengpeng
Feng, Yu
author_facet Li, Guangbin
Jiang, Wei
Kang, Yunteng
Yu, Xiaojun
Zhang, Chengpeng
Feng, Yu
author_sort Li, Guangbin
collection PubMed
description BACKGROUND: To undertake a bioinformatics analysis to identify abnormally expressed genes [also referred to as differentially expressed genes (DEGs)] and their functions in esophageal carcinoma (ESCA). METHODS: DEGs (i.e., GSE100942, GSE17351, GSE26886, and GSE77861) were obtained from a gene expression omnibus database. Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses were performed using online tools from the Database for Annotation, Visualization and Integrated Discovery. A protein-protein interaction network was then constructed based on the Search Tool for the Retrieval of Interacting Genes website. Cytoscape software was used to identify the top 20 DEGs located in the central region of the network. For the overall survival analysis, a Kaplan–Meier analysis was conducted of the Gene Expression Profiling Interactive Analysis website, and collagen (COL) 1A2 was selected to detect the molecular mechanism of COL1A2-small interfering ribonucleic acid (siRNA) in the following ESCA cell lines: Eca109 and TE-1. Next, the expression of COL1A2-messanger ribonucleic acid was determined using real-time quantitative polymerase chain reaction. The expression of COL1A2 was also verified by Western blot. Cell proliferation was measured by colony-forming and MTT assays, and migration and invasion by the transwell assay. RESULTS: Based on the GEO database and screening out the hub gene, we identified that COL1A2 was abnormally expressed in ESCA. With a series of in vitro experiments, the expression of COL1A2 was defined as higher in Eca109 and TE-1. CONCLUSIONS: COL1A2 was highly expressed in ESCA tissue samples. Additionally, the proliferation and metastasis of Eca109 and TE-1 cell lines were significantly attenuated by siRNA-COL1A2-mediated small interference. Notably, the expression level of COL1A2 was obviously related to the Akt and epithelial-mesenchymal transition (EMT) pathways.
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spelling pubmed-78121732021-01-22 High expression of collagen 1A2 promotes the proliferation and metastasis of esophageal cancer cells Li, Guangbin Jiang, Wei Kang, Yunteng Yu, Xiaojun Zhang, Chengpeng Feng, Yu Ann Transl Med Original Article BACKGROUND: To undertake a bioinformatics analysis to identify abnormally expressed genes [also referred to as differentially expressed genes (DEGs)] and their functions in esophageal carcinoma (ESCA). METHODS: DEGs (i.e., GSE100942, GSE17351, GSE26886, and GSE77861) were obtained from a gene expression omnibus database. Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses were performed using online tools from the Database for Annotation, Visualization and Integrated Discovery. A protein-protein interaction network was then constructed based on the Search Tool for the Retrieval of Interacting Genes website. Cytoscape software was used to identify the top 20 DEGs located in the central region of the network. For the overall survival analysis, a Kaplan–Meier analysis was conducted of the Gene Expression Profiling Interactive Analysis website, and collagen (COL) 1A2 was selected to detect the molecular mechanism of COL1A2-small interfering ribonucleic acid (siRNA) in the following ESCA cell lines: Eca109 and TE-1. Next, the expression of COL1A2-messanger ribonucleic acid was determined using real-time quantitative polymerase chain reaction. The expression of COL1A2 was also verified by Western blot. Cell proliferation was measured by colony-forming and MTT assays, and migration and invasion by the transwell assay. RESULTS: Based on the GEO database and screening out the hub gene, we identified that COL1A2 was abnormally expressed in ESCA. With a series of in vitro experiments, the expression of COL1A2 was defined as higher in Eca109 and TE-1. CONCLUSIONS: COL1A2 was highly expressed in ESCA tissue samples. Additionally, the proliferation and metastasis of Eca109 and TE-1 cell lines were significantly attenuated by siRNA-COL1A2-mediated small interference. Notably, the expression level of COL1A2 was obviously related to the Akt and epithelial-mesenchymal transition (EMT) pathways. AME Publishing Company 2020-12 /pmc/articles/PMC7812173/ /pubmed/33490184 http://dx.doi.org/10.21037/atm-20-7867 Text en 2020 Annals of Translational Medicine. All rights reserved. https://creativecommons.org/licenses/by-nc-nd/4.0/Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0 (https://creativecommons.org/licenses/by-nc-nd/4.0/) .
spellingShingle Original Article
Li, Guangbin
Jiang, Wei
Kang, Yunteng
Yu, Xiaojun
Zhang, Chengpeng
Feng, Yu
High expression of collagen 1A2 promotes the proliferation and metastasis of esophageal cancer cells
title High expression of collagen 1A2 promotes the proliferation and metastasis of esophageal cancer cells
title_full High expression of collagen 1A2 promotes the proliferation and metastasis of esophageal cancer cells
title_fullStr High expression of collagen 1A2 promotes the proliferation and metastasis of esophageal cancer cells
title_full_unstemmed High expression of collagen 1A2 promotes the proliferation and metastasis of esophageal cancer cells
title_short High expression of collagen 1A2 promotes the proliferation and metastasis of esophageal cancer cells
title_sort high expression of collagen 1a2 promotes the proliferation and metastasis of esophageal cancer cells
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7812173/
https://www.ncbi.nlm.nih.gov/pubmed/33490184
http://dx.doi.org/10.21037/atm-20-7867
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