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Geocoding cryptosporidiosis cases in Ireland (2008–2017)—development of a reliable, reproducible, multiphase geocoding methodology
BACKGROUND: Geocoding (the process of converting a text address into spatial data) quality may affect geospatial epidemiological study findings. No national standards for best geocoding practice exist in Ireland. Irish postcodes (Eircodes) are not routinely recorded for infectious disease notificati...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7813664/ https://www.ncbi.nlm.nih.gov/pubmed/33464478 http://dx.doi.org/10.1007/s11845-020-02468-0 |
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author | Domegan, Lisa Garvey, Patricia McKeown, Paul Johnson, Howard Hynds, Paul O’Dwyer, Jean ÓhAiseadha, Coilín |
author_facet | Domegan, Lisa Garvey, Patricia McKeown, Paul Johnson, Howard Hynds, Paul O’Dwyer, Jean ÓhAiseadha, Coilín |
author_sort | Domegan, Lisa |
collection | PubMed |
description | BACKGROUND: Geocoding (the process of converting a text address into spatial data) quality may affect geospatial epidemiological study findings. No national standards for best geocoding practice exist in Ireland. Irish postcodes (Eircodes) are not routinely recorded for infectious disease notifications and > 35% of dwellings have non-unique addresses. This may result in incomplete geocoding and introduce systematic errors into studies. AIMS: This study aimed to develop a reliable and reproducible methodology to geocode cryptosporidiosis notifications to fine-resolution spatial units (Census 2016 Small Areas), to enhance data validity and completeness, thus improving geospatial epidemiological studies. METHODS: A protocol was devised to utilise geocoding tools developed by the Health Service Executive’s Health Intelligence Unit. Geocoding employed finite-string automated and manual matching, undertaken sequentially in three additive phases. The protocol was applied to a cryptosporidiosis notification dataset (2008–2017) from Ireland’s Computerised Infectious Disease Reporting System. Outputs were validated against devised criteria. RESULTS: Overall, 92.1% (4266/4633) of cases were successfully geocoded to one Small Area, and 95.5% (n = 4425) to larger spatial units. The proportion of records geocoded increased by 14% using the multiphase approach, with 5% of records re-assigned to a different spatial unit. CONCLUSIONS: The developed multiphase protocol improved the completeness and validity of geocoding, thus increasing the power of subsequent studies. The authors recommend capturing Eircodes ideally using application programming interface for infectious disease or other health-related datasets, for more efficient and reliable geocoding. Where Eircodes are not recorded/available, for best geocoding practice, we recommend this (or a similar) quality driven protocol. |
format | Online Article Text |
id | pubmed-7813664 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-78136642021-01-18 Geocoding cryptosporidiosis cases in Ireland (2008–2017)—development of a reliable, reproducible, multiphase geocoding methodology Domegan, Lisa Garvey, Patricia McKeown, Paul Johnson, Howard Hynds, Paul O’Dwyer, Jean ÓhAiseadha, Coilín Ir J Med Sci Original Article BACKGROUND: Geocoding (the process of converting a text address into spatial data) quality may affect geospatial epidemiological study findings. No national standards for best geocoding practice exist in Ireland. Irish postcodes (Eircodes) are not routinely recorded for infectious disease notifications and > 35% of dwellings have non-unique addresses. This may result in incomplete geocoding and introduce systematic errors into studies. AIMS: This study aimed to develop a reliable and reproducible methodology to geocode cryptosporidiosis notifications to fine-resolution spatial units (Census 2016 Small Areas), to enhance data validity and completeness, thus improving geospatial epidemiological studies. METHODS: A protocol was devised to utilise geocoding tools developed by the Health Service Executive’s Health Intelligence Unit. Geocoding employed finite-string automated and manual matching, undertaken sequentially in three additive phases. The protocol was applied to a cryptosporidiosis notification dataset (2008–2017) from Ireland’s Computerised Infectious Disease Reporting System. Outputs were validated against devised criteria. RESULTS: Overall, 92.1% (4266/4633) of cases were successfully geocoded to one Small Area, and 95.5% (n = 4425) to larger spatial units. The proportion of records geocoded increased by 14% using the multiphase approach, with 5% of records re-assigned to a different spatial unit. CONCLUSIONS: The developed multiphase protocol improved the completeness and validity of geocoding, thus increasing the power of subsequent studies. The authors recommend capturing Eircodes ideally using application programming interface for infectious disease or other health-related datasets, for more efficient and reliable geocoding. Where Eircodes are not recorded/available, for best geocoding practice, we recommend this (or a similar) quality driven protocol. Springer International Publishing 2021-01-19 2021 /pmc/articles/PMC7813664/ /pubmed/33464478 http://dx.doi.org/10.1007/s11845-020-02468-0 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Original Article Domegan, Lisa Garvey, Patricia McKeown, Paul Johnson, Howard Hynds, Paul O’Dwyer, Jean ÓhAiseadha, Coilín Geocoding cryptosporidiosis cases in Ireland (2008–2017)—development of a reliable, reproducible, multiphase geocoding methodology |
title | Geocoding cryptosporidiosis cases in Ireland (2008–2017)—development of a reliable, reproducible, multiphase geocoding methodology |
title_full | Geocoding cryptosporidiosis cases in Ireland (2008–2017)—development of a reliable, reproducible, multiphase geocoding methodology |
title_fullStr | Geocoding cryptosporidiosis cases in Ireland (2008–2017)—development of a reliable, reproducible, multiphase geocoding methodology |
title_full_unstemmed | Geocoding cryptosporidiosis cases in Ireland (2008–2017)—development of a reliable, reproducible, multiphase geocoding methodology |
title_short | Geocoding cryptosporidiosis cases in Ireland (2008–2017)—development of a reliable, reproducible, multiphase geocoding methodology |
title_sort | geocoding cryptosporidiosis cases in ireland (2008–2017)—development of a reliable, reproducible, multiphase geocoding methodology |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7813664/ https://www.ncbi.nlm.nih.gov/pubmed/33464478 http://dx.doi.org/10.1007/s11845-020-02468-0 |
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