Cargando…

Geocoding cryptosporidiosis cases in Ireland (2008–2017)—development of a reliable, reproducible, multiphase geocoding methodology

BACKGROUND: Geocoding (the process of converting a text address into spatial data) quality may affect geospatial epidemiological study findings. No national standards for best geocoding practice exist in Ireland. Irish postcodes (Eircodes) are not routinely recorded for infectious disease notificati...

Descripción completa

Detalles Bibliográficos
Autores principales: Domegan, Lisa, Garvey, Patricia, McKeown, Paul, Johnson, Howard, Hynds, Paul, O’Dwyer, Jean, ÓhAiseadha, Coilín
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7813664/
https://www.ncbi.nlm.nih.gov/pubmed/33464478
http://dx.doi.org/10.1007/s11845-020-02468-0
_version_ 1783637899000938496
author Domegan, Lisa
Garvey, Patricia
McKeown, Paul
Johnson, Howard
Hynds, Paul
O’Dwyer, Jean
ÓhAiseadha, Coilín
author_facet Domegan, Lisa
Garvey, Patricia
McKeown, Paul
Johnson, Howard
Hynds, Paul
O’Dwyer, Jean
ÓhAiseadha, Coilín
author_sort Domegan, Lisa
collection PubMed
description BACKGROUND: Geocoding (the process of converting a text address into spatial data) quality may affect geospatial epidemiological study findings. No national standards for best geocoding practice exist in Ireland. Irish postcodes (Eircodes) are not routinely recorded for infectious disease notifications and > 35% of dwellings have non-unique addresses. This may result in incomplete geocoding and introduce systematic errors into studies. AIMS: This study aimed to develop a reliable and reproducible methodology to geocode cryptosporidiosis notifications to fine-resolution spatial units (Census 2016 Small Areas), to enhance data validity and completeness, thus improving geospatial epidemiological studies. METHODS: A protocol was devised to utilise geocoding tools developed by the Health Service Executive’s Health Intelligence Unit. Geocoding employed finite-string automated and manual matching, undertaken sequentially in three additive phases. The protocol was applied to a cryptosporidiosis notification dataset (2008–2017) from Ireland’s Computerised Infectious Disease Reporting System. Outputs were validated against devised criteria. RESULTS: Overall, 92.1% (4266/4633) of cases were successfully geocoded to one Small Area, and 95.5% (n = 4425) to larger spatial units. The proportion of records geocoded increased by 14% using the multiphase approach, with 5% of records re-assigned to a different spatial unit. CONCLUSIONS: The developed multiphase protocol improved the completeness and validity of geocoding, thus increasing the power of subsequent studies. The authors recommend capturing Eircodes ideally using application programming interface for infectious disease or other health-related datasets, for more efficient and reliable geocoding. Where Eircodes are not recorded/available, for best geocoding practice, we recommend this (or a similar) quality driven protocol.
format Online
Article
Text
id pubmed-7813664
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Springer International Publishing
record_format MEDLINE/PubMed
spelling pubmed-78136642021-01-18 Geocoding cryptosporidiosis cases in Ireland (2008–2017)—development of a reliable, reproducible, multiphase geocoding methodology Domegan, Lisa Garvey, Patricia McKeown, Paul Johnson, Howard Hynds, Paul O’Dwyer, Jean ÓhAiseadha, Coilín Ir J Med Sci Original Article BACKGROUND: Geocoding (the process of converting a text address into spatial data) quality may affect geospatial epidemiological study findings. No national standards for best geocoding practice exist in Ireland. Irish postcodes (Eircodes) are not routinely recorded for infectious disease notifications and > 35% of dwellings have non-unique addresses. This may result in incomplete geocoding and introduce systematic errors into studies. AIMS: This study aimed to develop a reliable and reproducible methodology to geocode cryptosporidiosis notifications to fine-resolution spatial units (Census 2016 Small Areas), to enhance data validity and completeness, thus improving geospatial epidemiological studies. METHODS: A protocol was devised to utilise geocoding tools developed by the Health Service Executive’s Health Intelligence Unit. Geocoding employed finite-string automated and manual matching, undertaken sequentially in three additive phases. The protocol was applied to a cryptosporidiosis notification dataset (2008–2017) from Ireland’s Computerised Infectious Disease Reporting System. Outputs were validated against devised criteria. RESULTS: Overall, 92.1% (4266/4633) of cases were successfully geocoded to one Small Area, and 95.5% (n = 4425) to larger spatial units. The proportion of records geocoded increased by 14% using the multiphase approach, with 5% of records re-assigned to a different spatial unit. CONCLUSIONS: The developed multiphase protocol improved the completeness and validity of geocoding, thus increasing the power of subsequent studies. The authors recommend capturing Eircodes ideally using application programming interface for infectious disease or other health-related datasets, for more efficient and reliable geocoding. Where Eircodes are not recorded/available, for best geocoding practice, we recommend this (or a similar) quality driven protocol. Springer International Publishing 2021-01-19 2021 /pmc/articles/PMC7813664/ /pubmed/33464478 http://dx.doi.org/10.1007/s11845-020-02468-0 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Original Article
Domegan, Lisa
Garvey, Patricia
McKeown, Paul
Johnson, Howard
Hynds, Paul
O’Dwyer, Jean
ÓhAiseadha, Coilín
Geocoding cryptosporidiosis cases in Ireland (2008–2017)—development of a reliable, reproducible, multiphase geocoding methodology
title Geocoding cryptosporidiosis cases in Ireland (2008–2017)—development of a reliable, reproducible, multiphase geocoding methodology
title_full Geocoding cryptosporidiosis cases in Ireland (2008–2017)—development of a reliable, reproducible, multiphase geocoding methodology
title_fullStr Geocoding cryptosporidiosis cases in Ireland (2008–2017)—development of a reliable, reproducible, multiphase geocoding methodology
title_full_unstemmed Geocoding cryptosporidiosis cases in Ireland (2008–2017)—development of a reliable, reproducible, multiphase geocoding methodology
title_short Geocoding cryptosporidiosis cases in Ireland (2008–2017)—development of a reliable, reproducible, multiphase geocoding methodology
title_sort geocoding cryptosporidiosis cases in ireland (2008–2017)—development of a reliable, reproducible, multiphase geocoding methodology
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7813664/
https://www.ncbi.nlm.nih.gov/pubmed/33464478
http://dx.doi.org/10.1007/s11845-020-02468-0
work_keys_str_mv AT domeganlisa geocodingcryptosporidiosiscasesinireland20082017developmentofareliablereproduciblemultiphasegeocodingmethodology
AT garveypatricia geocodingcryptosporidiosiscasesinireland20082017developmentofareliablereproduciblemultiphasegeocodingmethodology
AT mckeownpaul geocodingcryptosporidiosiscasesinireland20082017developmentofareliablereproduciblemultiphasegeocodingmethodology
AT johnsonhoward geocodingcryptosporidiosiscasesinireland20082017developmentofareliablereproduciblemultiphasegeocodingmethodology
AT hyndspaul geocodingcryptosporidiosiscasesinireland20082017developmentofareliablereproduciblemultiphasegeocodingmethodology
AT odwyerjean geocodingcryptosporidiosiscasesinireland20082017developmentofareliablereproduciblemultiphasegeocodingmethodology
AT ohaiseadhacoilin geocodingcryptosporidiosiscasesinireland20082017developmentofareliablereproduciblemultiphasegeocodingmethodology