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Radiolysis generates a complex organosynthetic chemical network

The architectural features of cellular life and its ecologies at larger scales are built upon foundational networks of reactions between molecules that avoid a collapse to equilibrium. The search for life’s origins is, in some respects, a search for biotic network attributes in abiotic chemical syst...

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Autores principales: Adam, Zachary R., Fahrenbach, Albert C., Jacobson, Sofia M., Kacar, Betul, Zubarev, Dmitry Yu.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7813863/
https://www.ncbi.nlm.nih.gov/pubmed/33462313
http://dx.doi.org/10.1038/s41598-021-81293-6
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author Adam, Zachary R.
Fahrenbach, Albert C.
Jacobson, Sofia M.
Kacar, Betul
Zubarev, Dmitry Yu.
author_facet Adam, Zachary R.
Fahrenbach, Albert C.
Jacobson, Sofia M.
Kacar, Betul
Zubarev, Dmitry Yu.
author_sort Adam, Zachary R.
collection PubMed
description The architectural features of cellular life and its ecologies at larger scales are built upon foundational networks of reactions between molecules that avoid a collapse to equilibrium. The search for life’s origins is, in some respects, a search for biotic network attributes in abiotic chemical systems. Radiation chemistry has long been employed to model prebiotic reaction networks, and here we report network-level analyses carried out on a compiled database of radiolysis reactions, acquired by the scientific community over decades of research. The resulting network shows robust connections between abundant geochemical reservoirs and the production of carboxylic acids, amino acids, and ribonucleotide precursors—the chemistry of which is predominantly dependent on radicals. Moreover, the network exhibits the following measurable attributes associated with biological systems: (1) the species connectivity histogram exhibits a heterogeneous (heavy-tailed) distribution, (2) overlapping families of closed-loop cycles, and (3) a hierarchical arrangement of chemical species with a bottom-heavy energy-size spectrum. The latter attribute is implicated with stability and entropy production in complex systems, notably in ecology where it is known as a trophic pyramid. Radiolysis is implicated as a driver of abiotic chemical organization and could provide insights about the complex and perhaps radical-dependent mechanisms associated with life’s origins.
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spelling pubmed-78138632021-01-21 Radiolysis generates a complex organosynthetic chemical network Adam, Zachary R. Fahrenbach, Albert C. Jacobson, Sofia M. Kacar, Betul Zubarev, Dmitry Yu. Sci Rep Article The architectural features of cellular life and its ecologies at larger scales are built upon foundational networks of reactions between molecules that avoid a collapse to equilibrium. The search for life’s origins is, in some respects, a search for biotic network attributes in abiotic chemical systems. Radiation chemistry has long been employed to model prebiotic reaction networks, and here we report network-level analyses carried out on a compiled database of radiolysis reactions, acquired by the scientific community over decades of research. The resulting network shows robust connections between abundant geochemical reservoirs and the production of carboxylic acids, amino acids, and ribonucleotide precursors—the chemistry of which is predominantly dependent on radicals. Moreover, the network exhibits the following measurable attributes associated with biological systems: (1) the species connectivity histogram exhibits a heterogeneous (heavy-tailed) distribution, (2) overlapping families of closed-loop cycles, and (3) a hierarchical arrangement of chemical species with a bottom-heavy energy-size spectrum. The latter attribute is implicated with stability and entropy production in complex systems, notably in ecology where it is known as a trophic pyramid. Radiolysis is implicated as a driver of abiotic chemical organization and could provide insights about the complex and perhaps radical-dependent mechanisms associated with life’s origins. Nature Publishing Group UK 2021-01-18 /pmc/articles/PMC7813863/ /pubmed/33462313 http://dx.doi.org/10.1038/s41598-021-81293-6 Text en © The Author(s) 2021 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Adam, Zachary R.
Fahrenbach, Albert C.
Jacobson, Sofia M.
Kacar, Betul
Zubarev, Dmitry Yu.
Radiolysis generates a complex organosynthetic chemical network
title Radiolysis generates a complex organosynthetic chemical network
title_full Radiolysis generates a complex organosynthetic chemical network
title_fullStr Radiolysis generates a complex organosynthetic chemical network
title_full_unstemmed Radiolysis generates a complex organosynthetic chemical network
title_short Radiolysis generates a complex organosynthetic chemical network
title_sort radiolysis generates a complex organosynthetic chemical network
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7813863/
https://www.ncbi.nlm.nih.gov/pubmed/33462313
http://dx.doi.org/10.1038/s41598-021-81293-6
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