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Agricultural Detection of Norovirus and Hepatitis A Using Fecal Indicators: A Systematic Review

Fresh-produce consumers may be at risk of pathogen infection due to fecal contamination of the agricultural environment. Indicators of fecal contamination may be used as a proxy to evaluate the potential presence of human pathogens, such as norovirus and hepatitis A, on agricultural samples. The obj...

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Autores principales: Victor, Courtney P., Ellis, Karen, Lamar, Frederica, Leon, Juan S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7817235/
https://www.ncbi.nlm.nih.gov/pubmed/33519936
http://dx.doi.org/10.1155/2021/6631920
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author Victor, Courtney P.
Ellis, Karen
Lamar, Frederica
Leon, Juan S.
author_facet Victor, Courtney P.
Ellis, Karen
Lamar, Frederica
Leon, Juan S.
author_sort Victor, Courtney P.
collection PubMed
description Fresh-produce consumers may be at risk of pathogen infection due to fecal contamination of the agricultural environment. Indicators of fecal contamination may be used as a proxy to evaluate the potential presence of human pathogens, such as norovirus and hepatitis A, on agricultural samples. The objective of this systematic review was to determine whether the presence of human norovirus or hepatitis A was associated with microbial indicators in agricultural samples including fresh produce, equipment surfaces, and hands. Four databases (Embase, PubMed, Web of Science, and Agricola) were systematically searched and fifteen articles met inclusion and exclusion criteria. After data extraction, individual indicator-pathogen relationships were assessed using Cohen's Kappa coefficient. The level of agreement between norovirus with adenovirus was 0.09 (n = 16, 95% CI −0.05, 0.23), indicating poor agreement using Landis and Koch's criterion. Similarly, the Kappa coefficient between norovirus with E. coli (κ = 0.04, n = 14, 95% CI −0.05, 0.49) or total coliforms (κ = 0.03, n = 4, 95% CI −0.01, 0.02) was also poor. The level of agreement between hepatitis A with adenovirus (κ = −0.03, n = 3, 95% CI −0.06, 0.01) or fecal coliforms (κ = 0, n = 1, 95% CI 0, 0) was also poor. There were moderate relationships between hepatitis A with E. coli (κ = 0.49, n = 3, 95% CI 0.28, 0.70) and total coliforms (κ = 0.47, n = 2, 95% CI 0.47, 0.47). Based on these limited results, common indicator organisms are not strong predictors of the presence of norovirus and hepatitis A virus in the agricultural environment.
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spelling pubmed-78172352021-01-28 Agricultural Detection of Norovirus and Hepatitis A Using Fecal Indicators: A Systematic Review Victor, Courtney P. Ellis, Karen Lamar, Frederica Leon, Juan S. Int J Microbiol Review Article Fresh-produce consumers may be at risk of pathogen infection due to fecal contamination of the agricultural environment. Indicators of fecal contamination may be used as a proxy to evaluate the potential presence of human pathogens, such as norovirus and hepatitis A, on agricultural samples. The objective of this systematic review was to determine whether the presence of human norovirus or hepatitis A was associated with microbial indicators in agricultural samples including fresh produce, equipment surfaces, and hands. Four databases (Embase, PubMed, Web of Science, and Agricola) were systematically searched and fifteen articles met inclusion and exclusion criteria. After data extraction, individual indicator-pathogen relationships were assessed using Cohen's Kappa coefficient. The level of agreement between norovirus with adenovirus was 0.09 (n = 16, 95% CI −0.05, 0.23), indicating poor agreement using Landis and Koch's criterion. Similarly, the Kappa coefficient between norovirus with E. coli (κ = 0.04, n = 14, 95% CI −0.05, 0.49) or total coliforms (κ = 0.03, n = 4, 95% CI −0.01, 0.02) was also poor. The level of agreement between hepatitis A with adenovirus (κ = −0.03, n = 3, 95% CI −0.06, 0.01) or fecal coliforms (κ = 0, n = 1, 95% CI 0, 0) was also poor. There were moderate relationships between hepatitis A with E. coli (κ = 0.49, n = 3, 95% CI 0.28, 0.70) and total coliforms (κ = 0.47, n = 2, 95% CI 0.47, 0.47). Based on these limited results, common indicator organisms are not strong predictors of the presence of norovirus and hepatitis A virus in the agricultural environment. Hindawi 2021-01-04 /pmc/articles/PMC7817235/ /pubmed/33519936 http://dx.doi.org/10.1155/2021/6631920 Text en Copyright © 2021 Courtney P. Victor et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Review Article
Victor, Courtney P.
Ellis, Karen
Lamar, Frederica
Leon, Juan S.
Agricultural Detection of Norovirus and Hepatitis A Using Fecal Indicators: A Systematic Review
title Agricultural Detection of Norovirus and Hepatitis A Using Fecal Indicators: A Systematic Review
title_full Agricultural Detection of Norovirus and Hepatitis A Using Fecal Indicators: A Systematic Review
title_fullStr Agricultural Detection of Norovirus and Hepatitis A Using Fecal Indicators: A Systematic Review
title_full_unstemmed Agricultural Detection of Norovirus and Hepatitis A Using Fecal Indicators: A Systematic Review
title_short Agricultural Detection of Norovirus and Hepatitis A Using Fecal Indicators: A Systematic Review
title_sort agricultural detection of norovirus and hepatitis a using fecal indicators: a systematic review
topic Review Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7817235/
https://www.ncbi.nlm.nih.gov/pubmed/33519936
http://dx.doi.org/10.1155/2021/6631920
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