Cargando…

LAPTM5 Plays a Key Role in the Diagnosis and Prognosis of Testicular Germ Cell Tumors

OBJECTIVE: Testicular germ cell tumors (TGCT) are a serious malignant tumor with low early diagnosis rates and high mortality. METHODS: To investigate novel biomarkers to predict the diagnosis and prognosis of this cancer, bioinformatics analysis was used as an accurate, efficient, and economical me...

Descripción completa

Detalles Bibliográficos
Autores principales: Li, Xiunan, Su, Yu, Zhang, Jiayao, Zhu, Ye, Xu, Yingkun, Wu, Guangzhen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7817270/
https://www.ncbi.nlm.nih.gov/pubmed/33521125
http://dx.doi.org/10.1155/2021/8816456
_version_ 1783638599692976128
author Li, Xiunan
Su, Yu
Zhang, Jiayao
Zhu, Ye
Xu, Yingkun
Wu, Guangzhen
author_facet Li, Xiunan
Su, Yu
Zhang, Jiayao
Zhu, Ye
Xu, Yingkun
Wu, Guangzhen
author_sort Li, Xiunan
collection PubMed
description OBJECTIVE: Testicular germ cell tumors (TGCT) are a serious malignant tumor with low early diagnosis rates and high mortality. METHODS: To investigate novel biomarkers to predict the diagnosis and prognosis of this cancer, bioinformatics analysis was used as an accurate, efficient, and economical method. RESULTS: Our study detected 39 upregulated and 589 downregulated differentially expressed genes (DEGs) using the GEO and TCGA databases. To identify the function of DEGs, GO functional analysis, three pathway analysis (KEGG, REACTOME, and PANTHER), and protein-protein interaction network were performed using the KOBAS website, as well as the String database. After a series of analyses in GEPIA and TIMER, including differential expression, we found one candidate gene related to the prognosis and diagnosis of TGCT. LAPTM5 was also associated with CD8+ T cell and PDCD1 expression, which suggests that it may affect immune infiltration. CONCLUSIONS: LAPTM5 was identified as a hub gene, which could be used as a potential biomarker for TGCT diagnosis and prognosis.
format Online
Article
Text
id pubmed-7817270
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Hindawi
record_format MEDLINE/PubMed
spelling pubmed-78172702021-01-28 LAPTM5 Plays a Key Role in the Diagnosis and Prognosis of Testicular Germ Cell Tumors Li, Xiunan Su, Yu Zhang, Jiayao Zhu, Ye Xu, Yingkun Wu, Guangzhen Int J Genomics Research Article OBJECTIVE: Testicular germ cell tumors (TGCT) are a serious malignant tumor with low early diagnosis rates and high mortality. METHODS: To investigate novel biomarkers to predict the diagnosis and prognosis of this cancer, bioinformatics analysis was used as an accurate, efficient, and economical method. RESULTS: Our study detected 39 upregulated and 589 downregulated differentially expressed genes (DEGs) using the GEO and TCGA databases. To identify the function of DEGs, GO functional analysis, three pathway analysis (KEGG, REACTOME, and PANTHER), and protein-protein interaction network were performed using the KOBAS website, as well as the String database. After a series of analyses in GEPIA and TIMER, including differential expression, we found one candidate gene related to the prognosis and diagnosis of TGCT. LAPTM5 was also associated with CD8+ T cell and PDCD1 expression, which suggests that it may affect immune infiltration. CONCLUSIONS: LAPTM5 was identified as a hub gene, which could be used as a potential biomarker for TGCT diagnosis and prognosis. Hindawi 2021-01-13 /pmc/articles/PMC7817270/ /pubmed/33521125 http://dx.doi.org/10.1155/2021/8816456 Text en Copyright © 2021 Xiunan Li et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Li, Xiunan
Su, Yu
Zhang, Jiayao
Zhu, Ye
Xu, Yingkun
Wu, Guangzhen
LAPTM5 Plays a Key Role in the Diagnosis and Prognosis of Testicular Germ Cell Tumors
title LAPTM5 Plays a Key Role in the Diagnosis and Prognosis of Testicular Germ Cell Tumors
title_full LAPTM5 Plays a Key Role in the Diagnosis and Prognosis of Testicular Germ Cell Tumors
title_fullStr LAPTM5 Plays a Key Role in the Diagnosis and Prognosis of Testicular Germ Cell Tumors
title_full_unstemmed LAPTM5 Plays a Key Role in the Diagnosis and Prognosis of Testicular Germ Cell Tumors
title_short LAPTM5 Plays a Key Role in the Diagnosis and Prognosis of Testicular Germ Cell Tumors
title_sort laptm5 plays a key role in the diagnosis and prognosis of testicular germ cell tumors
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7817270/
https://www.ncbi.nlm.nih.gov/pubmed/33521125
http://dx.doi.org/10.1155/2021/8816456
work_keys_str_mv AT lixiunan laptm5playsakeyroleinthediagnosisandprognosisoftesticulargermcelltumors
AT suyu laptm5playsakeyroleinthediagnosisandprognosisoftesticulargermcelltumors
AT zhangjiayao laptm5playsakeyroleinthediagnosisandprognosisoftesticulargermcelltumors
AT zhuye laptm5playsakeyroleinthediagnosisandprognosisoftesticulargermcelltumors
AT xuyingkun laptm5playsakeyroleinthediagnosisandprognosisoftesticulargermcelltumors
AT wuguangzhen laptm5playsakeyroleinthediagnosisandprognosisoftesticulargermcelltumors