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On the usage of average Hausdorff distance for segmentation performance assessment: hidden error when used for ranking
Average Hausdorff distance is a widely used performance measure to calculate the distance between two point sets. In medical image segmentation, it is used to compare ground truth images with segmentations allowing their ranking. We identified, however, ranking errors of average Hausdorff distance m...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Vienna
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7817746/ https://www.ncbi.nlm.nih.gov/pubmed/33474675 http://dx.doi.org/10.1186/s41747-020-00200-2 |
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author | Aydin, Orhun Utku Taha, Abdel Aziz Hilbert, Adam Khalil, Ahmed A. Galinovic, Ivana Fiebach, Jochen B. Frey, Dietmar Madai, Vince Istvan |
author_facet | Aydin, Orhun Utku Taha, Abdel Aziz Hilbert, Adam Khalil, Ahmed A. Galinovic, Ivana Fiebach, Jochen B. Frey, Dietmar Madai, Vince Istvan |
author_sort | Aydin, Orhun Utku |
collection | PubMed |
description | Average Hausdorff distance is a widely used performance measure to calculate the distance between two point sets. In medical image segmentation, it is used to compare ground truth images with segmentations allowing their ranking. We identified, however, ranking errors of average Hausdorff distance making it less suitable for applications in segmentation performance assessment. To mitigate this error, we present a modified calculation of this performance measure that we have coined “balanced average Hausdorff distance”. To simulate segmentations for ranking, we manually created non-overlapping segmentation errors common in magnetic resonance angiography cerebral vessel segmentation as our use-case. Adding the created errors consecutively and randomly to the ground truth, we created sets of simulated segmentations with increasing number of errors. Each set of simulated segmentations was ranked using both performance measures. We calculated the Kendall rank correlation coefficient between the segmentation ranking and the number of errors in each simulated segmentation. The rankings produced by balanced average Hausdorff distance had a significantly higher median correlation (1.00) than those by average Hausdorff distance (0.89). In 200 total rankings, the former misranked 52 whilst the latter misranked 179 segmentations. Balanced average Hausdorff distance is more suitable for rankings and quality assessment of segmentations than average Hausdorff distance. |
format | Online Article Text |
id | pubmed-7817746 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Springer Vienna |
record_format | MEDLINE/PubMed |
spelling | pubmed-78177462021-01-25 On the usage of average Hausdorff distance for segmentation performance assessment: hidden error when used for ranking Aydin, Orhun Utku Taha, Abdel Aziz Hilbert, Adam Khalil, Ahmed A. Galinovic, Ivana Fiebach, Jochen B. Frey, Dietmar Madai, Vince Istvan Eur Radiol Exp Methodology Average Hausdorff distance is a widely used performance measure to calculate the distance between two point sets. In medical image segmentation, it is used to compare ground truth images with segmentations allowing their ranking. We identified, however, ranking errors of average Hausdorff distance making it less suitable for applications in segmentation performance assessment. To mitigate this error, we present a modified calculation of this performance measure that we have coined “balanced average Hausdorff distance”. To simulate segmentations for ranking, we manually created non-overlapping segmentation errors common in magnetic resonance angiography cerebral vessel segmentation as our use-case. Adding the created errors consecutively and randomly to the ground truth, we created sets of simulated segmentations with increasing number of errors. Each set of simulated segmentations was ranked using both performance measures. We calculated the Kendall rank correlation coefficient between the segmentation ranking and the number of errors in each simulated segmentation. The rankings produced by balanced average Hausdorff distance had a significantly higher median correlation (1.00) than those by average Hausdorff distance (0.89). In 200 total rankings, the former misranked 52 whilst the latter misranked 179 segmentations. Balanced average Hausdorff distance is more suitable for rankings and quality assessment of segmentations than average Hausdorff distance. Springer Vienna 2021-01-21 /pmc/articles/PMC7817746/ /pubmed/33474675 http://dx.doi.org/10.1186/s41747-020-00200-2 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Methodology Aydin, Orhun Utku Taha, Abdel Aziz Hilbert, Adam Khalil, Ahmed A. Galinovic, Ivana Fiebach, Jochen B. Frey, Dietmar Madai, Vince Istvan On the usage of average Hausdorff distance for segmentation performance assessment: hidden error when used for ranking |
title | On the usage of average Hausdorff distance for segmentation performance assessment: hidden error when used for ranking |
title_full | On the usage of average Hausdorff distance for segmentation performance assessment: hidden error when used for ranking |
title_fullStr | On the usage of average Hausdorff distance for segmentation performance assessment: hidden error when used for ranking |
title_full_unstemmed | On the usage of average Hausdorff distance for segmentation performance assessment: hidden error when used for ranking |
title_short | On the usage of average Hausdorff distance for segmentation performance assessment: hidden error when used for ranking |
title_sort | on the usage of average hausdorff distance for segmentation performance assessment: hidden error when used for ranking |
topic | Methodology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7817746/ https://www.ncbi.nlm.nih.gov/pubmed/33474675 http://dx.doi.org/10.1186/s41747-020-00200-2 |
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