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On the usage of average Hausdorff distance for segmentation performance assessment: hidden error when used for ranking

Average Hausdorff distance is a widely used performance measure to calculate the distance between two point sets. In medical image segmentation, it is used to compare ground truth images with segmentations allowing their ranking. We identified, however, ranking errors of average Hausdorff distance m...

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Autores principales: Aydin, Orhun Utku, Taha, Abdel Aziz, Hilbert, Adam, Khalil, Ahmed A., Galinovic, Ivana, Fiebach, Jochen B., Frey, Dietmar, Madai, Vince Istvan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Vienna 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7817746/
https://www.ncbi.nlm.nih.gov/pubmed/33474675
http://dx.doi.org/10.1186/s41747-020-00200-2
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author Aydin, Orhun Utku
Taha, Abdel Aziz
Hilbert, Adam
Khalil, Ahmed A.
Galinovic, Ivana
Fiebach, Jochen B.
Frey, Dietmar
Madai, Vince Istvan
author_facet Aydin, Orhun Utku
Taha, Abdel Aziz
Hilbert, Adam
Khalil, Ahmed A.
Galinovic, Ivana
Fiebach, Jochen B.
Frey, Dietmar
Madai, Vince Istvan
author_sort Aydin, Orhun Utku
collection PubMed
description Average Hausdorff distance is a widely used performance measure to calculate the distance between two point sets. In medical image segmentation, it is used to compare ground truth images with segmentations allowing their ranking. We identified, however, ranking errors of average Hausdorff distance making it less suitable for applications in segmentation performance assessment. To mitigate this error, we present a modified calculation of this performance measure that we have coined “balanced average Hausdorff distance”. To simulate segmentations for ranking, we manually created non-overlapping segmentation errors common in magnetic resonance angiography cerebral vessel segmentation as our use-case. Adding the created errors consecutively and randomly to the ground truth, we created sets of simulated segmentations with increasing number of errors. Each set of simulated segmentations was ranked using both performance measures. We calculated the Kendall rank correlation coefficient between the segmentation ranking and the number of errors in each simulated segmentation. The rankings produced by balanced average Hausdorff distance had a significantly higher median correlation (1.00) than those by average Hausdorff distance (0.89). In 200 total rankings, the former misranked 52 whilst the latter misranked 179 segmentations. Balanced average Hausdorff distance is more suitable for rankings and quality assessment of segmentations than average Hausdorff distance.
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spelling pubmed-78177462021-01-25 On the usage of average Hausdorff distance for segmentation performance assessment: hidden error when used for ranking Aydin, Orhun Utku Taha, Abdel Aziz Hilbert, Adam Khalil, Ahmed A. Galinovic, Ivana Fiebach, Jochen B. Frey, Dietmar Madai, Vince Istvan Eur Radiol Exp Methodology Average Hausdorff distance is a widely used performance measure to calculate the distance between two point sets. In medical image segmentation, it is used to compare ground truth images with segmentations allowing their ranking. We identified, however, ranking errors of average Hausdorff distance making it less suitable for applications in segmentation performance assessment. To mitigate this error, we present a modified calculation of this performance measure that we have coined “balanced average Hausdorff distance”. To simulate segmentations for ranking, we manually created non-overlapping segmentation errors common in magnetic resonance angiography cerebral vessel segmentation as our use-case. Adding the created errors consecutively and randomly to the ground truth, we created sets of simulated segmentations with increasing number of errors. Each set of simulated segmentations was ranked using both performance measures. We calculated the Kendall rank correlation coefficient between the segmentation ranking and the number of errors in each simulated segmentation. The rankings produced by balanced average Hausdorff distance had a significantly higher median correlation (1.00) than those by average Hausdorff distance (0.89). In 200 total rankings, the former misranked 52 whilst the latter misranked 179 segmentations. Balanced average Hausdorff distance is more suitable for rankings and quality assessment of segmentations than average Hausdorff distance. Springer Vienna 2021-01-21 /pmc/articles/PMC7817746/ /pubmed/33474675 http://dx.doi.org/10.1186/s41747-020-00200-2 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Methodology
Aydin, Orhun Utku
Taha, Abdel Aziz
Hilbert, Adam
Khalil, Ahmed A.
Galinovic, Ivana
Fiebach, Jochen B.
Frey, Dietmar
Madai, Vince Istvan
On the usage of average Hausdorff distance for segmentation performance assessment: hidden error when used for ranking
title On the usage of average Hausdorff distance for segmentation performance assessment: hidden error when used for ranking
title_full On the usage of average Hausdorff distance for segmentation performance assessment: hidden error when used for ranking
title_fullStr On the usage of average Hausdorff distance for segmentation performance assessment: hidden error when used for ranking
title_full_unstemmed On the usage of average Hausdorff distance for segmentation performance assessment: hidden error when used for ranking
title_short On the usage of average Hausdorff distance for segmentation performance assessment: hidden error when used for ranking
title_sort on the usage of average hausdorff distance for segmentation performance assessment: hidden error when used for ranking
topic Methodology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7817746/
https://www.ncbi.nlm.nih.gov/pubmed/33474675
http://dx.doi.org/10.1186/s41747-020-00200-2
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