Cargando…

Mitochondrial genome of Aromia bungii (Coleoptera: Chrysomeloidea: Cerambycidae) and phylogenetic analysis

The red-necked longhorn beetle Aromia bungii is a major pest of peach orchards. In this study, we sequenced and analyzed the complete mitochondrial genome (mitogenome) of A. bungi,i. This mitogenome was 15,760 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs) and two...

Descripción completa

Detalles Bibliográficos
Autores principales: Li, Ruimin, Song, Xiang, Du, Yimin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7819112/
https://www.ncbi.nlm.nih.gov/pubmed/33521271
http://dx.doi.org/10.1080/23802359.2020.1846475
_version_ 1783638946414067712
author Li, Ruimin
Song, Xiang
Du, Yimin
author_facet Li, Ruimin
Song, Xiang
Du, Yimin
author_sort Li, Ruimin
collection PubMed
description The red-necked longhorn beetle Aromia bungii is a major pest of peach orchards. In this study, we sequenced and analyzed the complete mitochondrial genome (mitogenome) of A. bungi,i. This mitogenome was 15,760 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs) and two ribosomal RNA unit genes (rRNAs). Gene order was conserved and identical to most other previously sequenced Cerambycidae. Most PCGs of A. bungii have the conventional start codons ATN (six ATT, five ATG and one ATC), with the exception of nad1 (TTG). Except for three genes (cox1, cox2 and nad5) end with the incomplete stop codon T−, all other PCGs terminated with the stop codon TAA or TAG. The whole mitogenome exhibited heavy AT nucleotide bias (74.3%). Phylogenetic analysis positioned A. bungii in a well-supported clade within the subfamily Cerambycinae with Xystrocera globosa (tribe Xystrocerini). These results support the currently accepted taxonomy and provide a better understanding of the phylogenetic analysis of the Cerambycidae.
format Online
Article
Text
id pubmed-7819112
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-78191122021-01-28 Mitochondrial genome of Aromia bungii (Coleoptera: Chrysomeloidea: Cerambycidae) and phylogenetic analysis Li, Ruimin Song, Xiang Du, Yimin Mitochondrial DNA B Resour Mitogenome Announcement The red-necked longhorn beetle Aromia bungii is a major pest of peach orchards. In this study, we sequenced and analyzed the complete mitochondrial genome (mitogenome) of A. bungi,i. This mitogenome was 15,760 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs) and two ribosomal RNA unit genes (rRNAs). Gene order was conserved and identical to most other previously sequenced Cerambycidae. Most PCGs of A. bungii have the conventional start codons ATN (six ATT, five ATG and one ATC), with the exception of nad1 (TTG). Except for three genes (cox1, cox2 and nad5) end with the incomplete stop codon T−, all other PCGs terminated with the stop codon TAA or TAG. The whole mitogenome exhibited heavy AT nucleotide bias (74.3%). Phylogenetic analysis positioned A. bungii in a well-supported clade within the subfamily Cerambycinae with Xystrocera globosa (tribe Xystrocerini). These results support the currently accepted taxonomy and provide a better understanding of the phylogenetic analysis of the Cerambycidae. Taylor & Francis 2021-01-13 /pmc/articles/PMC7819112/ /pubmed/33521271 http://dx.doi.org/10.1080/23802359.2020.1846475 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Li, Ruimin
Song, Xiang
Du, Yimin
Mitochondrial genome of Aromia bungii (Coleoptera: Chrysomeloidea: Cerambycidae) and phylogenetic analysis
title Mitochondrial genome of Aromia bungii (Coleoptera: Chrysomeloidea: Cerambycidae) and phylogenetic analysis
title_full Mitochondrial genome of Aromia bungii (Coleoptera: Chrysomeloidea: Cerambycidae) and phylogenetic analysis
title_fullStr Mitochondrial genome of Aromia bungii (Coleoptera: Chrysomeloidea: Cerambycidae) and phylogenetic analysis
title_full_unstemmed Mitochondrial genome of Aromia bungii (Coleoptera: Chrysomeloidea: Cerambycidae) and phylogenetic analysis
title_short Mitochondrial genome of Aromia bungii (Coleoptera: Chrysomeloidea: Cerambycidae) and phylogenetic analysis
title_sort mitochondrial genome of aromia bungii (coleoptera: chrysomeloidea: cerambycidae) and phylogenetic analysis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7819112/
https://www.ncbi.nlm.nih.gov/pubmed/33521271
http://dx.doi.org/10.1080/23802359.2020.1846475
work_keys_str_mv AT liruimin mitochondrialgenomeofaromiabungiicoleopterachrysomeloideacerambycidaeandphylogeneticanalysis
AT songxiang mitochondrialgenomeofaromiabungiicoleopterachrysomeloideacerambycidaeandphylogeneticanalysis
AT duyimin mitochondrialgenomeofaromiabungiicoleopterachrysomeloideacerambycidaeandphylogeneticanalysis