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Mitochondrial genome of Aromia bungii (Coleoptera: Chrysomeloidea: Cerambycidae) and phylogenetic analysis
The red-necked longhorn beetle Aromia bungii is a major pest of peach orchards. In this study, we sequenced and analyzed the complete mitochondrial genome (mitogenome) of A. bungi,i. This mitogenome was 15,760 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs) and two...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7819112/ https://www.ncbi.nlm.nih.gov/pubmed/33521271 http://dx.doi.org/10.1080/23802359.2020.1846475 |
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author | Li, Ruimin Song, Xiang Du, Yimin |
author_facet | Li, Ruimin Song, Xiang Du, Yimin |
author_sort | Li, Ruimin |
collection | PubMed |
description | The red-necked longhorn beetle Aromia bungii is a major pest of peach orchards. In this study, we sequenced and analyzed the complete mitochondrial genome (mitogenome) of A. bungi,i. This mitogenome was 15,760 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs) and two ribosomal RNA unit genes (rRNAs). Gene order was conserved and identical to most other previously sequenced Cerambycidae. Most PCGs of A. bungii have the conventional start codons ATN (six ATT, five ATG and one ATC), with the exception of nad1 (TTG). Except for three genes (cox1, cox2 and nad5) end with the incomplete stop codon T−, all other PCGs terminated with the stop codon TAA or TAG. The whole mitogenome exhibited heavy AT nucleotide bias (74.3%). Phylogenetic analysis positioned A. bungii in a well-supported clade within the subfamily Cerambycinae with Xystrocera globosa (tribe Xystrocerini). These results support the currently accepted taxonomy and provide a better understanding of the phylogenetic analysis of the Cerambycidae. |
format | Online Article Text |
id | pubmed-7819112 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78191122021-01-28 Mitochondrial genome of Aromia bungii (Coleoptera: Chrysomeloidea: Cerambycidae) and phylogenetic analysis Li, Ruimin Song, Xiang Du, Yimin Mitochondrial DNA B Resour Mitogenome Announcement The red-necked longhorn beetle Aromia bungii is a major pest of peach orchards. In this study, we sequenced and analyzed the complete mitochondrial genome (mitogenome) of A. bungi,i. This mitogenome was 15,760 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs) and two ribosomal RNA unit genes (rRNAs). Gene order was conserved and identical to most other previously sequenced Cerambycidae. Most PCGs of A. bungii have the conventional start codons ATN (six ATT, five ATG and one ATC), with the exception of nad1 (TTG). Except for three genes (cox1, cox2 and nad5) end with the incomplete stop codon T−, all other PCGs terminated with the stop codon TAA or TAG. The whole mitogenome exhibited heavy AT nucleotide bias (74.3%). Phylogenetic analysis positioned A. bungii in a well-supported clade within the subfamily Cerambycinae with Xystrocera globosa (tribe Xystrocerini). These results support the currently accepted taxonomy and provide a better understanding of the phylogenetic analysis of the Cerambycidae. Taylor & Francis 2021-01-13 /pmc/articles/PMC7819112/ /pubmed/33521271 http://dx.doi.org/10.1080/23802359.2020.1846475 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Li, Ruimin Song, Xiang Du, Yimin Mitochondrial genome of Aromia bungii (Coleoptera: Chrysomeloidea: Cerambycidae) and phylogenetic analysis |
title | Mitochondrial genome of Aromia bungii (Coleoptera: Chrysomeloidea: Cerambycidae) and phylogenetic analysis |
title_full | Mitochondrial genome of Aromia bungii (Coleoptera: Chrysomeloidea: Cerambycidae) and phylogenetic analysis |
title_fullStr | Mitochondrial genome of Aromia bungii (Coleoptera: Chrysomeloidea: Cerambycidae) and phylogenetic analysis |
title_full_unstemmed | Mitochondrial genome of Aromia bungii (Coleoptera: Chrysomeloidea: Cerambycidae) and phylogenetic analysis |
title_short | Mitochondrial genome of Aromia bungii (Coleoptera: Chrysomeloidea: Cerambycidae) and phylogenetic analysis |
title_sort | mitochondrial genome of aromia bungii (coleoptera: chrysomeloidea: cerambycidae) and phylogenetic analysis |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7819112/ https://www.ncbi.nlm.nih.gov/pubmed/33521271 http://dx.doi.org/10.1080/23802359.2020.1846475 |
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