The complete chloroplast genome of Prunus japonica thunb.(Rosaceae), an ornamental and medicinal plant

Prunus japonica is an ornamental and medicinal plant that is widely cultivated. The complete chloroplast genome of P. japonica was sequenced using Illumina Hiseq X Ten platform. The chloroplast genome was 158,080 bp in length, containing two short inverted repeat (IRa and IRb) regions of 26,385 bp,...

Descripción completa

Detalles Bibliográficos
Autores principales: Mu, Jing, Zhao, Yuyang, He, Yali, Sun, Jiahui, Yuan, Qingjun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7819125/
https://www.ncbi.nlm.nih.gov/pubmed/33521281
http://dx.doi.org/10.1080/23802359.2020.1848477
_version_ 1783638949266194432
author Mu, Jing
Zhao, Yuyang
He, Yali
Sun, Jiahui
Yuan, Qingjun
author_facet Mu, Jing
Zhao, Yuyang
He, Yali
Sun, Jiahui
Yuan, Qingjun
author_sort Mu, Jing
collection PubMed
description Prunus japonica is an ornamental and medicinal plant that is widely cultivated. The complete chloroplast genome of P. japonica was sequenced using Illumina Hiseq X Ten platform. The chloroplast genome was 158,080 bp in length, containing two short inverted repeat (IRa and IRb) regions of 26,385 bp, which was separated by a large single copy (LSC) region of 86,270 bp and a small single copy (SSC) region of 19,040 bp. The GC content of the whole chloroplast genome was 36.8%. The chloroplast DNA of P. japonica comprised 112 distinct genes, including 78 protein-coding genes, 4 ribosomal RNA genes and 30 transfer RNA genes. Phylogenetic analysis indicated that all species of Prunus formed a monophyletic group, P. japonica was closely related to P. hulimis.
format Online
Article
Text
id pubmed-7819125
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-78191252021-01-28 The complete chloroplast genome of Prunus japonica thunb.(Rosaceae), an ornamental and medicinal plant Mu, Jing Zhao, Yuyang He, Yali Sun, Jiahui Yuan, Qingjun Mitochondrial DNA B Resour Mitogenome Announcement Prunus japonica is an ornamental and medicinal plant that is widely cultivated. The complete chloroplast genome of P. japonica was sequenced using Illumina Hiseq X Ten platform. The chloroplast genome was 158,080 bp in length, containing two short inverted repeat (IRa and IRb) regions of 26,385 bp, which was separated by a large single copy (LSC) region of 86,270 bp and a small single copy (SSC) region of 19,040 bp. The GC content of the whole chloroplast genome was 36.8%. The chloroplast DNA of P. japonica comprised 112 distinct genes, including 78 protein-coding genes, 4 ribosomal RNA genes and 30 transfer RNA genes. Phylogenetic analysis indicated that all species of Prunus formed a monophyletic group, P. japonica was closely related to P. hulimis. Taylor & Francis 2021-01-13 /pmc/articles/PMC7819125/ /pubmed/33521281 http://dx.doi.org/10.1080/23802359.2020.1848477 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Mu, Jing
Zhao, Yuyang
He, Yali
Sun, Jiahui
Yuan, Qingjun
The complete chloroplast genome of Prunus japonica thunb.(Rosaceae), an ornamental and medicinal plant
title The complete chloroplast genome of Prunus japonica thunb.(Rosaceae), an ornamental and medicinal plant
title_full The complete chloroplast genome of Prunus japonica thunb.(Rosaceae), an ornamental and medicinal plant
title_fullStr The complete chloroplast genome of Prunus japonica thunb.(Rosaceae), an ornamental and medicinal plant
title_full_unstemmed The complete chloroplast genome of Prunus japonica thunb.(Rosaceae), an ornamental and medicinal plant
title_short The complete chloroplast genome of Prunus japonica thunb.(Rosaceae), an ornamental and medicinal plant
title_sort complete chloroplast genome of prunus japonica thunb.(rosaceae), an ornamental and medicinal plant
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7819125/
https://www.ncbi.nlm.nih.gov/pubmed/33521281
http://dx.doi.org/10.1080/23802359.2020.1848477
work_keys_str_mv AT mujing thecompletechloroplastgenomeofprunusjaponicathunbrosaceaeanornamentalandmedicinalplant
AT zhaoyuyang thecompletechloroplastgenomeofprunusjaponicathunbrosaceaeanornamentalandmedicinalplant
AT heyali thecompletechloroplastgenomeofprunusjaponicathunbrosaceaeanornamentalandmedicinalplant
AT sunjiahui thecompletechloroplastgenomeofprunusjaponicathunbrosaceaeanornamentalandmedicinalplant
AT yuanqingjun thecompletechloroplastgenomeofprunusjaponicathunbrosaceaeanornamentalandmedicinalplant
AT mujing completechloroplastgenomeofprunusjaponicathunbrosaceaeanornamentalandmedicinalplant
AT zhaoyuyang completechloroplastgenomeofprunusjaponicathunbrosaceaeanornamentalandmedicinalplant
AT heyali completechloroplastgenomeofprunusjaponicathunbrosaceaeanornamentalandmedicinalplant
AT sunjiahui completechloroplastgenomeofprunusjaponicathunbrosaceaeanornamentalandmedicinalplant
AT yuanqingjun completechloroplastgenomeofprunusjaponicathunbrosaceaeanornamentalandmedicinalplant

Ejemplares similares