Complete mitochondrial genome of Sinogastromyzon szechuanensis (Teleostei, Cypriniformes, Balitoridae) obtained using next-generation sequencing

The complete mitogenome sequence of Sinogastromyzon szechuanensis was obtained using next generation sequencing and confirmed via overlap-PCR method. The genome was 16,565 bp in length and consisted of 13 protein-coding genes (PCGs), 2 ribosomal RNA genes, 23 transfer RNA genes and 1 control region....

Descripción completa

Detalles Bibliográficos
Autores principales: Li, Wei, Chen, Xiaggojiang, Zheng, Mengmeng, Wang, Yin, Zhou, Xingchen, Li, Haiyang, Zhou, Guolong, Li, Bichun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7819126/
https://www.ncbi.nlm.nih.gov/pubmed/33521270
http://dx.doi.org/10.1080/23802359.2020.1846471
_version_ 1783638949529387008
author Li, Wei
Chen, Xiaggojiang
Zheng, Mengmeng
Wang, Yin
Zhou, Xingchen
Li, Haiyang
Zhou, Guolong
Li, Bichun
author_facet Li, Wei
Chen, Xiaggojiang
Zheng, Mengmeng
Wang, Yin
Zhou, Xingchen
Li, Haiyang
Zhou, Guolong
Li, Bichun
author_sort Li, Wei
collection PubMed
description The complete mitogenome sequence of Sinogastromyzon szechuanensis was obtained using next generation sequencing and confirmed via overlap-PCR method. The genome was 16,565 bp in length and consisted of 13 protein-coding genes (PCGs), 2 ribosomal RNA genes, 23 transfer RNA genes and 1 control region. The overall nucleotide composition of heavy strand was 30.38% A (5033), 16.62% G (2753), 25.25% T (4182) and 27.75 (4597), with a slight A–T skew (55.63%), which is most obvious in the D-loop and most transfer RNA genes. Mitochondrial genome analyses based on ML analyses yielded identical phylogenetic trees.
format Online
Article
Text
id pubmed-7819126
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-78191262021-01-28 Complete mitochondrial genome of Sinogastromyzon szechuanensis (Teleostei, Cypriniformes, Balitoridae) obtained using next-generation sequencing Li, Wei Chen, Xiaggojiang Zheng, Mengmeng Wang, Yin Zhou, Xingchen Li, Haiyang Zhou, Guolong Li, Bichun Mitochondrial DNA B Resour Mitogenome Announcement The complete mitogenome sequence of Sinogastromyzon szechuanensis was obtained using next generation sequencing and confirmed via overlap-PCR method. The genome was 16,565 bp in length and consisted of 13 protein-coding genes (PCGs), 2 ribosomal RNA genes, 23 transfer RNA genes and 1 control region. The overall nucleotide composition of heavy strand was 30.38% A (5033), 16.62% G (2753), 25.25% T (4182) and 27.75 (4597), with a slight A–T skew (55.63%), which is most obvious in the D-loop and most transfer RNA genes. Mitochondrial genome analyses based on ML analyses yielded identical phylogenetic trees. Taylor & Francis 2021-01-12 /pmc/articles/PMC7819126/ /pubmed/33521270 http://dx.doi.org/10.1080/23802359.2020.1846471 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Li, Wei
Chen, Xiaggojiang
Zheng, Mengmeng
Wang, Yin
Zhou, Xingchen
Li, Haiyang
Zhou, Guolong
Li, Bichun
Complete mitochondrial genome of Sinogastromyzon szechuanensis (Teleostei, Cypriniformes, Balitoridae) obtained using next-generation sequencing
title Complete mitochondrial genome of Sinogastromyzon szechuanensis (Teleostei, Cypriniformes, Balitoridae) obtained using next-generation sequencing
title_full Complete mitochondrial genome of Sinogastromyzon szechuanensis (Teleostei, Cypriniformes, Balitoridae) obtained using next-generation sequencing
title_fullStr Complete mitochondrial genome of Sinogastromyzon szechuanensis (Teleostei, Cypriniformes, Balitoridae) obtained using next-generation sequencing
title_full_unstemmed Complete mitochondrial genome of Sinogastromyzon szechuanensis (Teleostei, Cypriniformes, Balitoridae) obtained using next-generation sequencing
title_short Complete mitochondrial genome of Sinogastromyzon szechuanensis (Teleostei, Cypriniformes, Balitoridae) obtained using next-generation sequencing
title_sort complete mitochondrial genome of sinogastromyzon szechuanensis (teleostei, cypriniformes, balitoridae) obtained using next-generation sequencing
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7819126/
https://www.ncbi.nlm.nih.gov/pubmed/33521270
http://dx.doi.org/10.1080/23802359.2020.1846471
work_keys_str_mv AT liwei completemitochondrialgenomeofsinogastromyzonszechuanensisteleosteicypriniformesbalitoridaeobtainedusingnextgenerationsequencing
AT chenxiaggojiang completemitochondrialgenomeofsinogastromyzonszechuanensisteleosteicypriniformesbalitoridaeobtainedusingnextgenerationsequencing
AT zhengmengmeng completemitochondrialgenomeofsinogastromyzonszechuanensisteleosteicypriniformesbalitoridaeobtainedusingnextgenerationsequencing
AT wangyin completemitochondrialgenomeofsinogastromyzonszechuanensisteleosteicypriniformesbalitoridaeobtainedusingnextgenerationsequencing
AT zhouxingchen completemitochondrialgenomeofsinogastromyzonszechuanensisteleosteicypriniformesbalitoridaeobtainedusingnextgenerationsequencing
AT lihaiyang completemitochondrialgenomeofsinogastromyzonszechuanensisteleosteicypriniformesbalitoridaeobtainedusingnextgenerationsequencing
AT zhouguolong completemitochondrialgenomeofsinogastromyzonszechuanensisteleosteicypriniformesbalitoridaeobtainedusingnextgenerationsequencing
AT libichun completemitochondrialgenomeofsinogastromyzonszechuanensisteleosteicypriniformesbalitoridaeobtainedusingnextgenerationsequencing

Ejemplares similares