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(1)H, (13)C and (15)N backbone chemical shift assignments of SARS-CoV-2 nsp3a

The non-structural protein nsp3 from SARS-CoV-2 plays an essential role in the viral replication transcription complex. Nsp3a constitutes the N-terminal domain of nsp3, comprising a ubiquitin-like folded domain and a disordered acidic chain. This region of nsp3a has been linked to interactions with...

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Autores principales: Salvi, Nicola, Bessa, Luiza Mamigonian, Guseva, Serafima, Camacho-Zarco, Aldo, Maurin, Damien, Perez, Laura Marino, Malki, Anas, Hengesbach, Martin, Korn, Sophie Marianne, Schlundt, Andreas, Schwalbe, Harald, Blackledge, Martin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Netherlands 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7819138/
https://www.ncbi.nlm.nih.gov/pubmed/33475934
http://dx.doi.org/10.1007/s12104-020-10001-8
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author Salvi, Nicola
Bessa, Luiza Mamigonian
Guseva, Serafima
Camacho-Zarco, Aldo
Maurin, Damien
Perez, Laura Marino
Malki, Anas
Hengesbach, Martin
Korn, Sophie Marianne
Schlundt, Andreas
Schwalbe, Harald
Blackledge, Martin
author_facet Salvi, Nicola
Bessa, Luiza Mamigonian
Guseva, Serafima
Camacho-Zarco, Aldo
Maurin, Damien
Perez, Laura Marino
Malki, Anas
Hengesbach, Martin
Korn, Sophie Marianne
Schlundt, Andreas
Schwalbe, Harald
Blackledge, Martin
author_sort Salvi, Nicola
collection PubMed
description The non-structural protein nsp3 from SARS-CoV-2 plays an essential role in the viral replication transcription complex. Nsp3a constitutes the N-terminal domain of nsp3, comprising a ubiquitin-like folded domain and a disordered acidic chain. This region of nsp3a has been linked to interactions with the viral nucleoprotein and the structure of double membrane vesicles. Here, we report the backbone resonance assignment of both domains of nsp3a. The study is carried out in the context of the international covid19-nmr consortium, which aims to characterize SARS-CoV-2 proteins and RNAs, providing for example NMR chemical shift assignments of the different viral components. Our assignment will provide the basis for the identification of inhibitors and further functional and interaction studies of this essential protein.
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spelling pubmed-78191382021-01-22 (1)H, (13)C and (15)N backbone chemical shift assignments of SARS-CoV-2 nsp3a Salvi, Nicola Bessa, Luiza Mamigonian Guseva, Serafima Camacho-Zarco, Aldo Maurin, Damien Perez, Laura Marino Malki, Anas Hengesbach, Martin Korn, Sophie Marianne Schlundt, Andreas Schwalbe, Harald Blackledge, Martin Biomol NMR Assign Article The non-structural protein nsp3 from SARS-CoV-2 plays an essential role in the viral replication transcription complex. Nsp3a constitutes the N-terminal domain of nsp3, comprising a ubiquitin-like folded domain and a disordered acidic chain. This region of nsp3a has been linked to interactions with the viral nucleoprotein and the structure of double membrane vesicles. Here, we report the backbone resonance assignment of both domains of nsp3a. The study is carried out in the context of the international covid19-nmr consortium, which aims to characterize SARS-CoV-2 proteins and RNAs, providing for example NMR chemical shift assignments of the different viral components. Our assignment will provide the basis for the identification of inhibitors and further functional and interaction studies of this essential protein. Springer Netherlands 2021-01-21 2021 /pmc/articles/PMC7819138/ /pubmed/33475934 http://dx.doi.org/10.1007/s12104-020-10001-8 Text en © The Author(s), under exclusive licence to Springer Nature B.V. part of Springer Nature 2021 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Article
Salvi, Nicola
Bessa, Luiza Mamigonian
Guseva, Serafima
Camacho-Zarco, Aldo
Maurin, Damien
Perez, Laura Marino
Malki, Anas
Hengesbach, Martin
Korn, Sophie Marianne
Schlundt, Andreas
Schwalbe, Harald
Blackledge, Martin
(1)H, (13)C and (15)N backbone chemical shift assignments of SARS-CoV-2 nsp3a
title (1)H, (13)C and (15)N backbone chemical shift assignments of SARS-CoV-2 nsp3a
title_full (1)H, (13)C and (15)N backbone chemical shift assignments of SARS-CoV-2 nsp3a
title_fullStr (1)H, (13)C and (15)N backbone chemical shift assignments of SARS-CoV-2 nsp3a
title_full_unstemmed (1)H, (13)C and (15)N backbone chemical shift assignments of SARS-CoV-2 nsp3a
title_short (1)H, (13)C and (15)N backbone chemical shift assignments of SARS-CoV-2 nsp3a
title_sort (1)h, (13)c and (15)n backbone chemical shift assignments of sars-cov-2 nsp3a
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7819138/
https://www.ncbi.nlm.nih.gov/pubmed/33475934
http://dx.doi.org/10.1007/s12104-020-10001-8
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