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A novel framework for rapid diagnosis of COVID-19 on computed tomography scans

Since the emergence of COVID-19, thousands of people undergo chest X-ray and computed tomography scan for its screening on everyday basis. This has increased the workload on radiologists, and a number of cases are in backlog. This is not only the case for COVID-19, but for the other abnormalities ne...

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Autores principales: Akram, Tallha, Attique, Muhammad, Gul, Salma, Shahzad, Aamir, Altaf, Muhammad, Naqvi, S. Syed Rameez, Damaševičius, Robertas, Maskeliūnas, Rytis
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer London 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7819829/
https://www.ncbi.nlm.nih.gov/pubmed/33500681
http://dx.doi.org/10.1007/s10044-020-00950-0
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author Akram, Tallha
Attique, Muhammad
Gul, Salma
Shahzad, Aamir
Altaf, Muhammad
Naqvi, S. Syed Rameez
Damaševičius, Robertas
Maskeliūnas, Rytis
author_facet Akram, Tallha
Attique, Muhammad
Gul, Salma
Shahzad, Aamir
Altaf, Muhammad
Naqvi, S. Syed Rameez
Damaševičius, Robertas
Maskeliūnas, Rytis
author_sort Akram, Tallha
collection PubMed
description Since the emergence of COVID-19, thousands of people undergo chest X-ray and computed tomography scan for its screening on everyday basis. This has increased the workload on radiologists, and a number of cases are in backlog. This is not only the case for COVID-19, but for the other abnormalities needing radiological diagnosis as well. In this work, we present an automated technique for rapid diagnosis of COVID-19 on computed tomography images. The proposed technique consists of four primary steps: (1) data collection and normalization, (2) extraction of the relevant features, (3) selection of the most optimal features and (4) feature classification. In the data collection step, we collect data for several patients from a public domain website, and perform preprocessing, which includes image resizing. In the successive step, we apply discrete wavelet transform and extended segmentation-based fractal texture analysis methods for extracting the relevant features. This is followed by application of an entropy controlled genetic algorithm for selection of the best features from each feature type, which are combined using a serial approach. In the final phase, the best features are subjected to various classifiers for the diagnosis. The proposed framework, when augmented with the Naive Bayes classifier, yields the best accuracy of 92.6%. The simulation results are supported by a detailed statistical analysis as a proof of concept.
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spelling pubmed-78198292021-01-22 A novel framework for rapid diagnosis of COVID-19 on computed tomography scans Akram, Tallha Attique, Muhammad Gul, Salma Shahzad, Aamir Altaf, Muhammad Naqvi, S. Syed Rameez Damaševičius, Robertas Maskeliūnas, Rytis Pattern Anal Appl Theoretical Advances Since the emergence of COVID-19, thousands of people undergo chest X-ray and computed tomography scan for its screening on everyday basis. This has increased the workload on radiologists, and a number of cases are in backlog. This is not only the case for COVID-19, but for the other abnormalities needing radiological diagnosis as well. In this work, we present an automated technique for rapid diagnosis of COVID-19 on computed tomography images. The proposed technique consists of four primary steps: (1) data collection and normalization, (2) extraction of the relevant features, (3) selection of the most optimal features and (4) feature classification. In the data collection step, we collect data for several patients from a public domain website, and perform preprocessing, which includes image resizing. In the successive step, we apply discrete wavelet transform and extended segmentation-based fractal texture analysis methods for extracting the relevant features. This is followed by application of an entropy controlled genetic algorithm for selection of the best features from each feature type, which are combined using a serial approach. In the final phase, the best features are subjected to various classifiers for the diagnosis. The proposed framework, when augmented with the Naive Bayes classifier, yields the best accuracy of 92.6%. The simulation results are supported by a detailed statistical analysis as a proof of concept. Springer London 2021-01-22 2021 /pmc/articles/PMC7819829/ /pubmed/33500681 http://dx.doi.org/10.1007/s10044-020-00950-0 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Theoretical Advances
Akram, Tallha
Attique, Muhammad
Gul, Salma
Shahzad, Aamir
Altaf, Muhammad
Naqvi, S. Syed Rameez
Damaševičius, Robertas
Maskeliūnas, Rytis
A novel framework for rapid diagnosis of COVID-19 on computed tomography scans
title A novel framework for rapid diagnosis of COVID-19 on computed tomography scans
title_full A novel framework for rapid diagnosis of COVID-19 on computed tomography scans
title_fullStr A novel framework for rapid diagnosis of COVID-19 on computed tomography scans
title_full_unstemmed A novel framework for rapid diagnosis of COVID-19 on computed tomography scans
title_short A novel framework for rapid diagnosis of COVID-19 on computed tomography scans
title_sort novel framework for rapid diagnosis of covid-19 on computed tomography scans
topic Theoretical Advances
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7819829/
https://www.ncbi.nlm.nih.gov/pubmed/33500681
http://dx.doi.org/10.1007/s10044-020-00950-0
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