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The human O-GlcNAcome database and meta-analysis

Over the past 35 years, ~1700 articles have characterized protein O-GlcNAcylation. Found in almost all living organisms, this post-translational modification of serine and threonine residues is highly conserved and key to biological processes. With half of the primary research articles using human m...

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Autores principales: Wulff-Fuentes, Eugenia, Berendt, Rex R., Massman, Logan, Danner, Laura, Malard, Florian, Vora, Jeet, Kahsay, Robel, Olivier-Van Stichelen, Stephanie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7820439/
https://www.ncbi.nlm.nih.gov/pubmed/33479245
http://dx.doi.org/10.1038/s41597-021-00810-4
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author Wulff-Fuentes, Eugenia
Berendt, Rex R.
Massman, Logan
Danner, Laura
Malard, Florian
Vora, Jeet
Kahsay, Robel
Olivier-Van Stichelen, Stephanie
author_facet Wulff-Fuentes, Eugenia
Berendt, Rex R.
Massman, Logan
Danner, Laura
Malard, Florian
Vora, Jeet
Kahsay, Robel
Olivier-Van Stichelen, Stephanie
author_sort Wulff-Fuentes, Eugenia
collection PubMed
description Over the past 35 years, ~1700 articles have characterized protein O-GlcNAcylation. Found in almost all living organisms, this post-translational modification of serine and threonine residues is highly conserved and key to biological processes. With half of the primary research articles using human models, the O-GlcNAcome recently reached a milestone of 5000 human proteins identified. Herein, we provide an extensive inventory of human O-GlcNAcylated proteins, their O-GlcNAc sites, identification methods, and corresponding references (www.oglcnac.mcw.edu). In the absence of a comprehensive online resource for O-GlcNAcylated proteins, this list serves as the only database of O-GlcNAcylated proteins. Based on the thorough analysis of the amino acid sequence surrounding 7002 O-GlcNAc sites, we progress toward a more robust semi-consensus sequence for O-GlcNAcylation. Moreover, we offer a comprehensive meta-analysis of human O-GlcNAcylated proteins for protein domains, cellular and tissue distribution, and pathways in health and diseases, reinforcing that O-GlcNAcylation is a master regulator of cell signaling, equal to the widely studied phosphorylation.
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spelling pubmed-78204392021-01-29 The human O-GlcNAcome database and meta-analysis Wulff-Fuentes, Eugenia Berendt, Rex R. Massman, Logan Danner, Laura Malard, Florian Vora, Jeet Kahsay, Robel Olivier-Van Stichelen, Stephanie Sci Data Analysis Over the past 35 years, ~1700 articles have characterized protein O-GlcNAcylation. Found in almost all living organisms, this post-translational modification of serine and threonine residues is highly conserved and key to biological processes. With half of the primary research articles using human models, the O-GlcNAcome recently reached a milestone of 5000 human proteins identified. Herein, we provide an extensive inventory of human O-GlcNAcylated proteins, their O-GlcNAc sites, identification methods, and corresponding references (www.oglcnac.mcw.edu). In the absence of a comprehensive online resource for O-GlcNAcylated proteins, this list serves as the only database of O-GlcNAcylated proteins. Based on the thorough analysis of the amino acid sequence surrounding 7002 O-GlcNAc sites, we progress toward a more robust semi-consensus sequence for O-GlcNAcylation. Moreover, we offer a comprehensive meta-analysis of human O-GlcNAcylated proteins for protein domains, cellular and tissue distribution, and pathways in health and diseases, reinforcing that O-GlcNAcylation is a master regulator of cell signaling, equal to the widely studied phosphorylation. Nature Publishing Group UK 2021-01-21 /pmc/articles/PMC7820439/ /pubmed/33479245 http://dx.doi.org/10.1038/s41597-021-00810-4 Text en © The Author(s) 2021 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Analysis
Wulff-Fuentes, Eugenia
Berendt, Rex R.
Massman, Logan
Danner, Laura
Malard, Florian
Vora, Jeet
Kahsay, Robel
Olivier-Van Stichelen, Stephanie
The human O-GlcNAcome database and meta-analysis
title The human O-GlcNAcome database and meta-analysis
title_full The human O-GlcNAcome database and meta-analysis
title_fullStr The human O-GlcNAcome database and meta-analysis
title_full_unstemmed The human O-GlcNAcome database and meta-analysis
title_short The human O-GlcNAcome database and meta-analysis
title_sort human o-glcnacome database and meta-analysis
topic Analysis
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7820439/
https://www.ncbi.nlm.nih.gov/pubmed/33479245
http://dx.doi.org/10.1038/s41597-021-00810-4
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