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Adaptive moving mesh algorithm based on local reaction rate
An empirical mesh adaption algorithm is introduced for modeling one-dimensional reaction-diffusion systems with large moving gradients. Our new algorithm is based on the revelation, that in reaction-diffusion systems the high moving concentration gradients appear nearby to the region where the rate...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7820511/ https://www.ncbi.nlm.nih.gov/pubmed/33521342 http://dx.doi.org/10.1016/j.heliyon.2020.e05842 |
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author | Koncz, Viktória Izsák, Ferenc Noszticzius, Zoltán Kály-Kullai, Kristóf |
author_facet | Koncz, Viktória Izsák, Ferenc Noszticzius, Zoltán Kály-Kullai, Kristóf |
author_sort | Koncz, Viktória |
collection | PubMed |
description | An empirical mesh adaption algorithm is introduced for modeling one-dimensional reaction-diffusion systems with large moving gradients. Our new algorithm is based on the revelation, that in reaction-diffusion systems the high moving concentration gradients appear nearby to the region where the rate of reaction is maximal, thus the local reaction rate can be used to control the mesh adaption. We found, that the main advantage of such a method is its simplicity and easy implementation. As an example we study an acid-base diode, where large moving gradients appear. The mathematical model of the diode contains several parabolic PDEs, coupled with one elliptic PDE. An r-refinement technique is used and attached to the commercial finite element solver COMSOL. We investigated the time-dependent salt effects of the diode with our developed algorithm. Our mesh adaption method is advantageous for modeling of any reaction-diffusion systems with localized high concentration gradients. |
format | Online Article Text |
id | pubmed-7820511 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-78205112021-01-29 Adaptive moving mesh algorithm based on local reaction rate Koncz, Viktória Izsák, Ferenc Noszticzius, Zoltán Kály-Kullai, Kristóf Heliyon Research Article An empirical mesh adaption algorithm is introduced for modeling one-dimensional reaction-diffusion systems with large moving gradients. Our new algorithm is based on the revelation, that in reaction-diffusion systems the high moving concentration gradients appear nearby to the region where the rate of reaction is maximal, thus the local reaction rate can be used to control the mesh adaption. We found, that the main advantage of such a method is its simplicity and easy implementation. As an example we study an acid-base diode, where large moving gradients appear. The mathematical model of the diode contains several parabolic PDEs, coupled with one elliptic PDE. An r-refinement technique is used and attached to the commercial finite element solver COMSOL. We investigated the time-dependent salt effects of the diode with our developed algorithm. Our mesh adaption method is advantageous for modeling of any reaction-diffusion systems with localized high concentration gradients. Elsevier 2021-01-19 /pmc/articles/PMC7820511/ /pubmed/33521342 http://dx.doi.org/10.1016/j.heliyon.2020.e05842 Text en © 2020 Published by Elsevier Ltd. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Research Article Koncz, Viktória Izsák, Ferenc Noszticzius, Zoltán Kály-Kullai, Kristóf Adaptive moving mesh algorithm based on local reaction rate |
title | Adaptive moving mesh algorithm based on local reaction rate |
title_full | Adaptive moving mesh algorithm based on local reaction rate |
title_fullStr | Adaptive moving mesh algorithm based on local reaction rate |
title_full_unstemmed | Adaptive moving mesh algorithm based on local reaction rate |
title_short | Adaptive moving mesh algorithm based on local reaction rate |
title_sort | adaptive moving mesh algorithm based on local reaction rate |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7820511/ https://www.ncbi.nlm.nih.gov/pubmed/33521342 http://dx.doi.org/10.1016/j.heliyon.2020.e05842 |
work_keys_str_mv | AT konczviktoria adaptivemovingmeshalgorithmbasedonlocalreactionrate AT izsakferenc adaptivemovingmeshalgorithmbasedonlocalreactionrate AT noszticziuszoltan adaptivemovingmeshalgorithmbasedonlocalreactionrate AT kalykullaikristof adaptivemovingmeshalgorithmbasedonlocalreactionrate |