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A Systematic Review of Plants With Antibacterial Activities: A Taxonomic and Phylogenetic Perspective

Background: Antimicrobial resistance represents a serious threat to human health across the globe. The cost of bringing a new antibiotic from discovery to market is high and return on investment is low. Furthermore, the development of new antibiotics has slowed dramatically since the 1950s’ golden a...

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Autores principales: Chassagne, François, Samarakoon, Tharanga, Porras, Gina, Lyles, James T., Dettweiler, Micah, Marquez, Lewis, Salam, Akram M., Shabih, Sarah, Farrokhi, Darya Raschid, Quave, Cassandra L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7821031/
https://www.ncbi.nlm.nih.gov/pubmed/33488385
http://dx.doi.org/10.3389/fphar.2020.586548
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author Chassagne, François
Samarakoon, Tharanga
Porras, Gina
Lyles, James T.
Dettweiler, Micah
Marquez, Lewis
Salam, Akram M.
Shabih, Sarah
Farrokhi, Darya Raschid
Quave, Cassandra L.
author_facet Chassagne, François
Samarakoon, Tharanga
Porras, Gina
Lyles, James T.
Dettweiler, Micah
Marquez, Lewis
Salam, Akram M.
Shabih, Sarah
Farrokhi, Darya Raschid
Quave, Cassandra L.
author_sort Chassagne, François
collection PubMed
description Background: Antimicrobial resistance represents a serious threat to human health across the globe. The cost of bringing a new antibiotic from discovery to market is high and return on investment is low. Furthermore, the development of new antibiotics has slowed dramatically since the 1950s’ golden age of discovery. Plants produce a variety of bioactive secondary metabolites that could be used to fuel the future discovery pipeline. While many studies have focused on specific aspects of plants and plant natural products with antibacterial properties, a comprehensive review of the antibacterial potential of plants has never before been attempted. Objectives: This systematic review aims to evaluate reports on plants with significant antibacterial activities. Methods: Following the PRISMA model, we searched three electronic databases: Web of Science, PubMed and SciFinder by using specific keywords: “plant,” “antibacterial,” “inhibitory concentration.” Results: We identified a total of 6,083 articles published between 1946 and 2019 and then reviewed 66% of these (4,024) focusing on articles published between 2012 and 2019. A rigorous selection process was implemented using clear inclusion and exclusion criteria, yielding data on 958 plant species derived from 483 scientific articles. Antibacterial activity is found in 51 of 79 vascular plant orders throughout the phylogenetic tree. Most are reported within eudicots, with the bulk of species being asterids. Antibacterial activity is not prominent in monocotyledons. Phylogenetic distribution strongly supports the concept of chemical evolution across plant clades, especially in more derived eudicot families. The Lamiaceae, Fabaceae and Asteraceae were the most represented plant families, while Cinnamomum verum, Rosmarinus vulgaris and Thymus vulgaris were the most studied species. South Africa was the most represented site of plant collection. Crude extraction in methanol was the most represented type of extraction and leaves were the main plant tissue investigated. Finally, Staphylococcus aureus was the most targeted pathogenic bacteria in these studies. We closely examine 70 prominent medicinal plant species from the 15 families most studied in the literature. Conclusion: This review depicts the current state of knowledge regarding antibacterials from plants and provides powerful recommendations for future research directions.
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spelling pubmed-78210312021-01-23 A Systematic Review of Plants With Antibacterial Activities: A Taxonomic and Phylogenetic Perspective Chassagne, François Samarakoon, Tharanga Porras, Gina Lyles, James T. Dettweiler, Micah Marquez, Lewis Salam, Akram M. Shabih, Sarah Farrokhi, Darya Raschid Quave, Cassandra L. Front Pharmacol Pharmacology Background: Antimicrobial resistance represents a serious threat to human health across the globe. The cost of bringing a new antibiotic from discovery to market is high and return on investment is low. Furthermore, the development of new antibiotics has slowed dramatically since the 1950s’ golden age of discovery. Plants produce a variety of bioactive secondary metabolites that could be used to fuel the future discovery pipeline. While many studies have focused on specific aspects of plants and plant natural products with antibacterial properties, a comprehensive review of the antibacterial potential of plants has never before been attempted. Objectives: This systematic review aims to evaluate reports on plants with significant antibacterial activities. Methods: Following the PRISMA model, we searched three electronic databases: Web of Science, PubMed and SciFinder by using specific keywords: “plant,” “antibacterial,” “inhibitory concentration.” Results: We identified a total of 6,083 articles published between 1946 and 2019 and then reviewed 66% of these (4,024) focusing on articles published between 2012 and 2019. A rigorous selection process was implemented using clear inclusion and exclusion criteria, yielding data on 958 plant species derived from 483 scientific articles. Antibacterial activity is found in 51 of 79 vascular plant orders throughout the phylogenetic tree. Most are reported within eudicots, with the bulk of species being asterids. Antibacterial activity is not prominent in monocotyledons. Phylogenetic distribution strongly supports the concept of chemical evolution across plant clades, especially in more derived eudicot families. The Lamiaceae, Fabaceae and Asteraceae were the most represented plant families, while Cinnamomum verum, Rosmarinus vulgaris and Thymus vulgaris were the most studied species. South Africa was the most represented site of plant collection. Crude extraction in methanol was the most represented type of extraction and leaves were the main plant tissue investigated. Finally, Staphylococcus aureus was the most targeted pathogenic bacteria in these studies. We closely examine 70 prominent medicinal plant species from the 15 families most studied in the literature. Conclusion: This review depicts the current state of knowledge regarding antibacterials from plants and provides powerful recommendations for future research directions. Frontiers Media S.A. 2021-01-08 /pmc/articles/PMC7821031/ /pubmed/33488385 http://dx.doi.org/10.3389/fphar.2020.586548 Text en Copyright © 2021 Chassagne, Samarakoon, Porras, Lyles, Dettweiler, Marquez, Salam, Shabih, Farrokhi and Quave. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Pharmacology
Chassagne, François
Samarakoon, Tharanga
Porras, Gina
Lyles, James T.
Dettweiler, Micah
Marquez, Lewis
Salam, Akram M.
Shabih, Sarah
Farrokhi, Darya Raschid
Quave, Cassandra L.
A Systematic Review of Plants With Antibacterial Activities: A Taxonomic and Phylogenetic Perspective
title A Systematic Review of Plants With Antibacterial Activities: A Taxonomic and Phylogenetic Perspective
title_full A Systematic Review of Plants With Antibacterial Activities: A Taxonomic and Phylogenetic Perspective
title_fullStr A Systematic Review of Plants With Antibacterial Activities: A Taxonomic and Phylogenetic Perspective
title_full_unstemmed A Systematic Review of Plants With Antibacterial Activities: A Taxonomic and Phylogenetic Perspective
title_short A Systematic Review of Plants With Antibacterial Activities: A Taxonomic and Phylogenetic Perspective
title_sort systematic review of plants with antibacterial activities: a taxonomic and phylogenetic perspective
topic Pharmacology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7821031/
https://www.ncbi.nlm.nih.gov/pubmed/33488385
http://dx.doi.org/10.3389/fphar.2020.586548
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