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A stack LSTM structure for decoding continuous force from local field potential signal of primary motor cortex (M1)

BACKGROUND: Brain Computer Interfaces (BCIs) translate the activity of the nervous system to a control signal which is interpretable for an external device. Using continuous motor BCIs, the user will be able to control a robotic arm or a disabled limb continuously. In addition to decoding the target...

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Autores principales: Kashefi, Mehrdad, Daliri, Mohammad Reza
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7821526/
https://www.ncbi.nlm.nih.gov/pubmed/33482716
http://dx.doi.org/10.1186/s12859-020-03953-0
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author Kashefi, Mehrdad
Daliri, Mohammad Reza
author_facet Kashefi, Mehrdad
Daliri, Mohammad Reza
author_sort Kashefi, Mehrdad
collection PubMed
description BACKGROUND: Brain Computer Interfaces (BCIs) translate the activity of the nervous system to a control signal which is interpretable for an external device. Using continuous motor BCIs, the user will be able to control a robotic arm or a disabled limb continuously. In addition to decoding the target position, accurate decoding of force amplitude is essential for designing BCI systems capable of performing fine movements like grasping. In this study, we proposed a stack Long Short-Term Memory (LSTM) neural network which was able to accurately predict the force amplitude applied by three freely moving rats using their Local Field Potential (LFP) signal. RESULTS: The performance of the network was compared with the Partial Least Square (PLS) method. The average coefficient of correlation (r) for three rats were 0.67 in PLS and 0.73 in LSTM based network and the coefficient of determination ([Formula: see text] ) were 0.45 and 0.54 for PLS and LSTM based network, respectively. The network was able to accurately decode the force values without explicitly using time lags in the input features. Additionally, the proposed method was able to predict zero-force values very accurately due to benefiting from an output nonlinearity. CONCLUSION: The proposed stack LSTM structure was able to predict applied force from the LFP signal accurately. In addition to higher accuracy, these results were achieved without explicitly using time lags in input features which can lead to more accurate and faster BCI systems.
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spelling pubmed-78215262021-01-22 A stack LSTM structure for decoding continuous force from local field potential signal of primary motor cortex (M1) Kashefi, Mehrdad Daliri, Mohammad Reza BMC Bioinformatics Research Article BACKGROUND: Brain Computer Interfaces (BCIs) translate the activity of the nervous system to a control signal which is interpretable for an external device. Using continuous motor BCIs, the user will be able to control a robotic arm or a disabled limb continuously. In addition to decoding the target position, accurate decoding of force amplitude is essential for designing BCI systems capable of performing fine movements like grasping. In this study, we proposed a stack Long Short-Term Memory (LSTM) neural network which was able to accurately predict the force amplitude applied by three freely moving rats using their Local Field Potential (LFP) signal. RESULTS: The performance of the network was compared with the Partial Least Square (PLS) method. The average coefficient of correlation (r) for three rats were 0.67 in PLS and 0.73 in LSTM based network and the coefficient of determination ([Formula: see text] ) were 0.45 and 0.54 for PLS and LSTM based network, respectively. The network was able to accurately decode the force values without explicitly using time lags in the input features. Additionally, the proposed method was able to predict zero-force values very accurately due to benefiting from an output nonlinearity. CONCLUSION: The proposed stack LSTM structure was able to predict applied force from the LFP signal accurately. In addition to higher accuracy, these results were achieved without explicitly using time lags in input features which can lead to more accurate and faster BCI systems. BioMed Central 2021-01-22 /pmc/articles/PMC7821526/ /pubmed/33482716 http://dx.doi.org/10.1186/s12859-020-03953-0 Text en © The Author(s) 2021 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research Article
Kashefi, Mehrdad
Daliri, Mohammad Reza
A stack LSTM structure for decoding continuous force from local field potential signal of primary motor cortex (M1)
title A stack LSTM structure for decoding continuous force from local field potential signal of primary motor cortex (M1)
title_full A stack LSTM structure for decoding continuous force from local field potential signal of primary motor cortex (M1)
title_fullStr A stack LSTM structure for decoding continuous force from local field potential signal of primary motor cortex (M1)
title_full_unstemmed A stack LSTM structure for decoding continuous force from local field potential signal of primary motor cortex (M1)
title_short A stack LSTM structure for decoding continuous force from local field potential signal of primary motor cortex (M1)
title_sort stack lstm structure for decoding continuous force from local field potential signal of primary motor cortex (m1)
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7821526/
https://www.ncbi.nlm.nih.gov/pubmed/33482716
http://dx.doi.org/10.1186/s12859-020-03953-0
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