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One test for all: whole exome sequencing significantly improves the diagnostic yield in growth retarded patients referred for molecular testing for Silver–Russell syndrome

BACKGROUND: Silver-Russell syndrome (SRS) is an imprinting disorder which is characterised by severe primordial growth retardation, relative macrocephaly and a typical facial gestalt. The clinical heterogeneity of SRS is reflected by a broad spectrum of molecular changes with hypomethylation in 11p1...

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Autores principales: Meyer, Robert, Begemann, Matthias, Hübner, Christian Thomas, Dey, Daniela, Kuechler, Alma, Elgizouli, Magdeldin, Schara, Ulrike, Ambrozaityte, Laima, Burnyte, Birute, Schröder, Carmen, Kenawy, Asmaa, Kroisel, Peter, Demuth, Stephanie, Fekete, Gyorgy, Opladen, Thomas, Elbracht, Miriam, Eggermann, Thomas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7821667/
https://www.ncbi.nlm.nih.gov/pubmed/33482836
http://dx.doi.org/10.1186/s13023-021-01683-x
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author Meyer, Robert
Begemann, Matthias
Hübner, Christian Thomas
Dey, Daniela
Kuechler, Alma
Elgizouli, Magdeldin
Schara, Ulrike
Ambrozaityte, Laima
Burnyte, Birute
Schröder, Carmen
Kenawy, Asmaa
Kroisel, Peter
Demuth, Stephanie
Fekete, Gyorgy
Opladen, Thomas
Elbracht, Miriam
Eggermann, Thomas
author_facet Meyer, Robert
Begemann, Matthias
Hübner, Christian Thomas
Dey, Daniela
Kuechler, Alma
Elgizouli, Magdeldin
Schara, Ulrike
Ambrozaityte, Laima
Burnyte, Birute
Schröder, Carmen
Kenawy, Asmaa
Kroisel, Peter
Demuth, Stephanie
Fekete, Gyorgy
Opladen, Thomas
Elbracht, Miriam
Eggermann, Thomas
author_sort Meyer, Robert
collection PubMed
description BACKGROUND: Silver-Russell syndrome (SRS) is an imprinting disorder which is characterised by severe primordial growth retardation, relative macrocephaly and a typical facial gestalt. The clinical heterogeneity of SRS is reflected by a broad spectrum of molecular changes with hypomethylation in 11p15 and maternal uniparental disomy of chromosome 7 (upd(7)mat) as the most frequent findings. Monogenetic causes are rare, but a clinical overlap with numerous other disorders has been reported. However, a comprehensive overview on the contribution of mutations in differential diagnostic genes to phenotypes reminiscent to SRS is missing due to the lack of appropriate tests. With the implementation of next generation sequencing (NGS) tools this limitation can now be circumvented. MAIN BODY: We analysed 75 patients referred for molecular testing for SRS by a NGS-based multigene panel, whole exome sequencing (WES), and trio-based WES. In 21/75 patients a disease-causing variant could be identified among them variants in known SRS genes (IGF2, PLAG1, HMGA2). Several patients carried variants in genes which have not yet been considered as differential diagnoses of SRS. CONCLUSIONS: WES approaches significantly increase the diagnostic yield in patients referred for SRS testing. Several of the identified monogenetic disorders have a major impact on clinical management and genetic counseling.
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spelling pubmed-78216672021-01-25 One test for all: whole exome sequencing significantly improves the diagnostic yield in growth retarded patients referred for molecular testing for Silver–Russell syndrome Meyer, Robert Begemann, Matthias Hübner, Christian Thomas Dey, Daniela Kuechler, Alma Elgizouli, Magdeldin Schara, Ulrike Ambrozaityte, Laima Burnyte, Birute Schröder, Carmen Kenawy, Asmaa Kroisel, Peter Demuth, Stephanie Fekete, Gyorgy Opladen, Thomas Elbracht, Miriam Eggermann, Thomas Orphanet J Rare Dis Research BACKGROUND: Silver-Russell syndrome (SRS) is an imprinting disorder which is characterised by severe primordial growth retardation, relative macrocephaly and a typical facial gestalt. The clinical heterogeneity of SRS is reflected by a broad spectrum of molecular changes with hypomethylation in 11p15 and maternal uniparental disomy of chromosome 7 (upd(7)mat) as the most frequent findings. Monogenetic causes are rare, but a clinical overlap with numerous other disorders has been reported. However, a comprehensive overview on the contribution of mutations in differential diagnostic genes to phenotypes reminiscent to SRS is missing due to the lack of appropriate tests. With the implementation of next generation sequencing (NGS) tools this limitation can now be circumvented. MAIN BODY: We analysed 75 patients referred for molecular testing for SRS by a NGS-based multigene panel, whole exome sequencing (WES), and trio-based WES. In 21/75 patients a disease-causing variant could be identified among them variants in known SRS genes (IGF2, PLAG1, HMGA2). Several patients carried variants in genes which have not yet been considered as differential diagnoses of SRS. CONCLUSIONS: WES approaches significantly increase the diagnostic yield in patients referred for SRS testing. Several of the identified monogenetic disorders have a major impact on clinical management and genetic counseling. BioMed Central 2021-01-22 /pmc/articles/PMC7821667/ /pubmed/33482836 http://dx.doi.org/10.1186/s13023-021-01683-x Text en © The Author(s) 2021 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Meyer, Robert
Begemann, Matthias
Hübner, Christian Thomas
Dey, Daniela
Kuechler, Alma
Elgizouli, Magdeldin
Schara, Ulrike
Ambrozaityte, Laima
Burnyte, Birute
Schröder, Carmen
Kenawy, Asmaa
Kroisel, Peter
Demuth, Stephanie
Fekete, Gyorgy
Opladen, Thomas
Elbracht, Miriam
Eggermann, Thomas
One test for all: whole exome sequencing significantly improves the diagnostic yield in growth retarded patients referred for molecular testing for Silver–Russell syndrome
title One test for all: whole exome sequencing significantly improves the diagnostic yield in growth retarded patients referred for molecular testing for Silver–Russell syndrome
title_full One test for all: whole exome sequencing significantly improves the diagnostic yield in growth retarded patients referred for molecular testing for Silver–Russell syndrome
title_fullStr One test for all: whole exome sequencing significantly improves the diagnostic yield in growth retarded patients referred for molecular testing for Silver–Russell syndrome
title_full_unstemmed One test for all: whole exome sequencing significantly improves the diagnostic yield in growth retarded patients referred for molecular testing for Silver–Russell syndrome
title_short One test for all: whole exome sequencing significantly improves the diagnostic yield in growth retarded patients referred for molecular testing for Silver–Russell syndrome
title_sort one test for all: whole exome sequencing significantly improves the diagnostic yield in growth retarded patients referred for molecular testing for silver–russell syndrome
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7821667/
https://www.ncbi.nlm.nih.gov/pubmed/33482836
http://dx.doi.org/10.1186/s13023-021-01683-x
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