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The functional analysis of ABCG transporters in the adaptation of pigeon pea (Cajanus cajan) to abiotic stresses
ATP-binding cassette (ABC) transporters are a class of proteins found in living organisms that mediate transmembrane transport by hydrolyzing ATP. They play a vital role in the physiological processes of growth and development in plants. The most numerous sub-type transporter in the ABC transporter...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7821757/ https://www.ncbi.nlm.nih.gov/pubmed/33552725 http://dx.doi.org/10.7717/peerj.10688 |
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author | Niu, Lili Li, Hanghang Song, Zhihua Dong, Biying Cao, Hongyan Liu, Tengyue Du, Tingting Yang, Wanlong Amin, Rohul Wang, Litao Yang, Qing Meng, Dong Fu, Yujie |
author_facet | Niu, Lili Li, Hanghang Song, Zhihua Dong, Biying Cao, Hongyan Liu, Tengyue Du, Tingting Yang, Wanlong Amin, Rohul Wang, Litao Yang, Qing Meng, Dong Fu, Yujie |
author_sort | Niu, Lili |
collection | PubMed |
description | ATP-binding cassette (ABC) transporters are a class of proteins found in living organisms that mediate transmembrane transport by hydrolyzing ATP. They play a vital role in the physiological processes of growth and development in plants. The most numerous sub-type transporter in the ABC transporter family is the ABCG group and which have the most complex function in a plant’s response to abiotic stresses. Our study focused on the effect of ABCG transporters in the adaptation of the pigeon pea to adverse environments (such as drought, salt, temperature, etc.). We conducted a functional analysis of ABCG transporters in the pigeon pea and their role in response to abiotic stresses. A total of 51 ABCG genes (CcABCGs) were identified, and phylogenetic analysis was conducted. We also identified the physicochemical properties of the encoded proteins, predicted their subcellular localization, and identified of the conserved domains. Expression analysis showed that ABCG genes have different expression profiles with tissues and abiotic stresses. Our results showed that CcABCG28 was up-regulated at low temperatures, and CcABCG7 was up-regulated with drought and aluminum stress. The initial results revealed that ABCG transporters are more effective in the abiotic stress resistance of pigeon peas, which improves our understanding of their application in abiotic stress resistance. |
format | Online Article Text |
id | pubmed-7821757 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-78217572021-02-04 The functional analysis of ABCG transporters in the adaptation of pigeon pea (Cajanus cajan) to abiotic stresses Niu, Lili Li, Hanghang Song, Zhihua Dong, Biying Cao, Hongyan Liu, Tengyue Du, Tingting Yang, Wanlong Amin, Rohul Wang, Litao Yang, Qing Meng, Dong Fu, Yujie PeerJ Molecular Biology ATP-binding cassette (ABC) transporters are a class of proteins found in living organisms that mediate transmembrane transport by hydrolyzing ATP. They play a vital role in the physiological processes of growth and development in plants. The most numerous sub-type transporter in the ABC transporter family is the ABCG group and which have the most complex function in a plant’s response to abiotic stresses. Our study focused on the effect of ABCG transporters in the adaptation of the pigeon pea to adverse environments (such as drought, salt, temperature, etc.). We conducted a functional analysis of ABCG transporters in the pigeon pea and their role in response to abiotic stresses. A total of 51 ABCG genes (CcABCGs) were identified, and phylogenetic analysis was conducted. We also identified the physicochemical properties of the encoded proteins, predicted their subcellular localization, and identified of the conserved domains. Expression analysis showed that ABCG genes have different expression profiles with tissues and abiotic stresses. Our results showed that CcABCG28 was up-regulated at low temperatures, and CcABCG7 was up-regulated with drought and aluminum stress. The initial results revealed that ABCG transporters are more effective in the abiotic stress resistance of pigeon peas, which improves our understanding of their application in abiotic stress resistance. PeerJ Inc. 2021-01-19 /pmc/articles/PMC7821757/ /pubmed/33552725 http://dx.doi.org/10.7717/peerj.10688 Text en ©2021 Niu et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Molecular Biology Niu, Lili Li, Hanghang Song, Zhihua Dong, Biying Cao, Hongyan Liu, Tengyue Du, Tingting Yang, Wanlong Amin, Rohul Wang, Litao Yang, Qing Meng, Dong Fu, Yujie The functional analysis of ABCG transporters in the adaptation of pigeon pea (Cajanus cajan) to abiotic stresses |
title | The functional analysis of ABCG transporters in the adaptation of pigeon pea (Cajanus cajan) to abiotic stresses |
title_full | The functional analysis of ABCG transporters in the adaptation of pigeon pea (Cajanus cajan) to abiotic stresses |
title_fullStr | The functional analysis of ABCG transporters in the adaptation of pigeon pea (Cajanus cajan) to abiotic stresses |
title_full_unstemmed | The functional analysis of ABCG transporters in the adaptation of pigeon pea (Cajanus cajan) to abiotic stresses |
title_short | The functional analysis of ABCG transporters in the adaptation of pigeon pea (Cajanus cajan) to abiotic stresses |
title_sort | functional analysis of abcg transporters in the adaptation of pigeon pea (cajanus cajan) to abiotic stresses |
topic | Molecular Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7821757/ https://www.ncbi.nlm.nih.gov/pubmed/33552725 http://dx.doi.org/10.7717/peerj.10688 |
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