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The functional analysis of ABCG transporters in the adaptation of pigeon pea (Cajanus cajan) to abiotic stresses

ATP-binding cassette (ABC) transporters are a class of proteins found in living organisms that mediate transmembrane transport by hydrolyzing ATP. They play a vital role in the physiological processes of growth and development in plants. The most numerous sub-type transporter in the ABC transporter...

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Autores principales: Niu, Lili, Li, Hanghang, Song, Zhihua, Dong, Biying, Cao, Hongyan, Liu, Tengyue, Du, Tingting, Yang, Wanlong, Amin, Rohul, Wang, Litao, Yang, Qing, Meng, Dong, Fu, Yujie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7821757/
https://www.ncbi.nlm.nih.gov/pubmed/33552725
http://dx.doi.org/10.7717/peerj.10688
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author Niu, Lili
Li, Hanghang
Song, Zhihua
Dong, Biying
Cao, Hongyan
Liu, Tengyue
Du, Tingting
Yang, Wanlong
Amin, Rohul
Wang, Litao
Yang, Qing
Meng, Dong
Fu, Yujie
author_facet Niu, Lili
Li, Hanghang
Song, Zhihua
Dong, Biying
Cao, Hongyan
Liu, Tengyue
Du, Tingting
Yang, Wanlong
Amin, Rohul
Wang, Litao
Yang, Qing
Meng, Dong
Fu, Yujie
author_sort Niu, Lili
collection PubMed
description ATP-binding cassette (ABC) transporters are a class of proteins found in living organisms that mediate transmembrane transport by hydrolyzing ATP. They play a vital role in the physiological processes of growth and development in plants. The most numerous sub-type transporter in the ABC transporter family is the ABCG group and which have the most complex function in a plant’s response to abiotic stresses. Our study focused on the effect of ABCG transporters in the adaptation of the pigeon pea to adverse environments (such as drought, salt, temperature, etc.). We conducted a functional analysis of ABCG transporters in the pigeon pea and their role in response to abiotic stresses. A total of 51 ABCG genes (CcABCGs) were identified, and phylogenetic analysis was conducted. We also identified the physicochemical properties of the encoded proteins, predicted their subcellular localization, and identified of the conserved domains. Expression analysis showed that ABCG genes have different expression profiles with tissues and abiotic stresses. Our results showed that CcABCG28 was up-regulated at low temperatures, and CcABCG7 was up-regulated with drought and aluminum stress. The initial results revealed that ABCG transporters are more effective in the abiotic stress resistance of pigeon peas, which improves our understanding of their application in abiotic stress resistance.
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spelling pubmed-78217572021-02-04 The functional analysis of ABCG transporters in the adaptation of pigeon pea (Cajanus cajan) to abiotic stresses Niu, Lili Li, Hanghang Song, Zhihua Dong, Biying Cao, Hongyan Liu, Tengyue Du, Tingting Yang, Wanlong Amin, Rohul Wang, Litao Yang, Qing Meng, Dong Fu, Yujie PeerJ Molecular Biology ATP-binding cassette (ABC) transporters are a class of proteins found in living organisms that mediate transmembrane transport by hydrolyzing ATP. They play a vital role in the physiological processes of growth and development in plants. The most numerous sub-type transporter in the ABC transporter family is the ABCG group and which have the most complex function in a plant’s response to abiotic stresses. Our study focused on the effect of ABCG transporters in the adaptation of the pigeon pea to adverse environments (such as drought, salt, temperature, etc.). We conducted a functional analysis of ABCG transporters in the pigeon pea and their role in response to abiotic stresses. A total of 51 ABCG genes (CcABCGs) were identified, and phylogenetic analysis was conducted. We also identified the physicochemical properties of the encoded proteins, predicted their subcellular localization, and identified of the conserved domains. Expression analysis showed that ABCG genes have different expression profiles with tissues and abiotic stresses. Our results showed that CcABCG28 was up-regulated at low temperatures, and CcABCG7 was up-regulated with drought and aluminum stress. The initial results revealed that ABCG transporters are more effective in the abiotic stress resistance of pigeon peas, which improves our understanding of their application in abiotic stress resistance. PeerJ Inc. 2021-01-19 /pmc/articles/PMC7821757/ /pubmed/33552725 http://dx.doi.org/10.7717/peerj.10688 Text en ©2021 Niu et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Molecular Biology
Niu, Lili
Li, Hanghang
Song, Zhihua
Dong, Biying
Cao, Hongyan
Liu, Tengyue
Du, Tingting
Yang, Wanlong
Amin, Rohul
Wang, Litao
Yang, Qing
Meng, Dong
Fu, Yujie
The functional analysis of ABCG transporters in the adaptation of pigeon pea (Cajanus cajan) to abiotic stresses
title The functional analysis of ABCG transporters in the adaptation of pigeon pea (Cajanus cajan) to abiotic stresses
title_full The functional analysis of ABCG transporters in the adaptation of pigeon pea (Cajanus cajan) to abiotic stresses
title_fullStr The functional analysis of ABCG transporters in the adaptation of pigeon pea (Cajanus cajan) to abiotic stresses
title_full_unstemmed The functional analysis of ABCG transporters in the adaptation of pigeon pea (Cajanus cajan) to abiotic stresses
title_short The functional analysis of ABCG transporters in the adaptation of pigeon pea (Cajanus cajan) to abiotic stresses
title_sort functional analysis of abcg transporters in the adaptation of pigeon pea (cajanus cajan) to abiotic stresses
topic Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7821757/
https://www.ncbi.nlm.nih.gov/pubmed/33552725
http://dx.doi.org/10.7717/peerj.10688
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