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In-Series U-Net Network to 3D Tumor Image Reconstruction for Liver Hepatocellular Carcinoma Recognition
Cancer is one of the common diseases. Quantitative biomarkers extracted from standard-of-care computed tomography (CT) scan can create a robust clinical decision tool for the diagnosis of hepatocellular carcinoma (HCC). According to the current clinical methods, the situation usually accounts for hi...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7822491/ https://www.ncbi.nlm.nih.gov/pubmed/33374672 http://dx.doi.org/10.3390/diagnostics11010011 |
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author | Chen, Wen-Fan Ou, Hsin-You Liu, Keng-Hao Li, Zhi-Yun Liao, Chien-Chang Wang, Shao-Yu Huang, Wen Cheng, Yu-Fan Pan, Cheng-Tang |
author_facet | Chen, Wen-Fan Ou, Hsin-You Liu, Keng-Hao Li, Zhi-Yun Liao, Chien-Chang Wang, Shao-Yu Huang, Wen Cheng, Yu-Fan Pan, Cheng-Tang |
author_sort | Chen, Wen-Fan |
collection | PubMed |
description | Cancer is one of the common diseases. Quantitative biomarkers extracted from standard-of-care computed tomography (CT) scan can create a robust clinical decision tool for the diagnosis of hepatocellular carcinoma (HCC). According to the current clinical methods, the situation usually accounts for high expenditure of time and resources. To improve the current clinical diagnosis and therapeutic procedure, this paper proposes a deep learning-based approach, called Successive Encoder-Decoder (SED), to assist in the automatic interpretation of liver lesion/tumor segmentation through CT images. The SED framework consists of two different encoder-decoder networks connected in series. The first network aims to remove unwanted voxels and organs and to extract liver locations from CT images. The second network uses the results of the first network to further segment the lesions. For practical purpose, the predicted lesions on individual CTs were extracted and reconstructed on 3D images. The experiments conducted on 4300 CT images and LiTS dataset demonstrate that the liver segmentation and the tumor prediction achieved 0.92 and 0.75 in Dice score, respectively, by as-proposed SED method. |
format | Online Article Text |
id | pubmed-7822491 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-78224912021-01-23 In-Series U-Net Network to 3D Tumor Image Reconstruction for Liver Hepatocellular Carcinoma Recognition Chen, Wen-Fan Ou, Hsin-You Liu, Keng-Hao Li, Zhi-Yun Liao, Chien-Chang Wang, Shao-Yu Huang, Wen Cheng, Yu-Fan Pan, Cheng-Tang Diagnostics (Basel) Article Cancer is one of the common diseases. Quantitative biomarkers extracted from standard-of-care computed tomography (CT) scan can create a robust clinical decision tool for the diagnosis of hepatocellular carcinoma (HCC). According to the current clinical methods, the situation usually accounts for high expenditure of time and resources. To improve the current clinical diagnosis and therapeutic procedure, this paper proposes a deep learning-based approach, called Successive Encoder-Decoder (SED), to assist in the automatic interpretation of liver lesion/tumor segmentation through CT images. The SED framework consists of two different encoder-decoder networks connected in series. The first network aims to remove unwanted voxels and organs and to extract liver locations from CT images. The second network uses the results of the first network to further segment the lesions. For practical purpose, the predicted lesions on individual CTs were extracted and reconstructed on 3D images. The experiments conducted on 4300 CT images and LiTS dataset demonstrate that the liver segmentation and the tumor prediction achieved 0.92 and 0.75 in Dice score, respectively, by as-proposed SED method. MDPI 2020-12-23 /pmc/articles/PMC7822491/ /pubmed/33374672 http://dx.doi.org/10.3390/diagnostics11010011 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Chen, Wen-Fan Ou, Hsin-You Liu, Keng-Hao Li, Zhi-Yun Liao, Chien-Chang Wang, Shao-Yu Huang, Wen Cheng, Yu-Fan Pan, Cheng-Tang In-Series U-Net Network to 3D Tumor Image Reconstruction for Liver Hepatocellular Carcinoma Recognition |
title | In-Series U-Net Network to 3D Tumor Image Reconstruction for Liver Hepatocellular Carcinoma Recognition |
title_full | In-Series U-Net Network to 3D Tumor Image Reconstruction for Liver Hepatocellular Carcinoma Recognition |
title_fullStr | In-Series U-Net Network to 3D Tumor Image Reconstruction for Liver Hepatocellular Carcinoma Recognition |
title_full_unstemmed | In-Series U-Net Network to 3D Tumor Image Reconstruction for Liver Hepatocellular Carcinoma Recognition |
title_short | In-Series U-Net Network to 3D Tumor Image Reconstruction for Liver Hepatocellular Carcinoma Recognition |
title_sort | in-series u-net network to 3d tumor image reconstruction for liver hepatocellular carcinoma recognition |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7822491/ https://www.ncbi.nlm.nih.gov/pubmed/33374672 http://dx.doi.org/10.3390/diagnostics11010011 |
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