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Convolutional Neural Network for Automatic Identification of Plant Diseases with Limited Data

Automated identification of plant diseases is very important for crop protection. Most automated approaches aim to build classification models based on leaf or fruit images. These approaches usually require the collection and annotation of many images, which is difficult and costly process especiall...

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Autores principales: Afifi, Ahmed, Alhumam, Abdulaziz, Abdelwahab, Amira
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7823428/
https://www.ncbi.nlm.nih.gov/pubmed/33374398
http://dx.doi.org/10.3390/plants10010028
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author Afifi, Ahmed
Alhumam, Abdulaziz
Abdelwahab, Amira
author_facet Afifi, Ahmed
Alhumam, Abdulaziz
Abdelwahab, Amira
author_sort Afifi, Ahmed
collection PubMed
description Automated identification of plant diseases is very important for crop protection. Most automated approaches aim to build classification models based on leaf or fruit images. These approaches usually require the collection and annotation of many images, which is difficult and costly process especially in the case of new or rare diseases. Therefore, in this study, we developed and evaluated several methods for identifying plant diseases with little data. Convolutional Neural Networks (CNNs) are used due to their superior ability to transfer learning. Three CNN architectures (ResNet18, ResNet34, and ResNet50) were used to build two baseline models, a Triplet network and a deep adversarial Metric Learning (DAML) approach. These approaches were trained from a large source domain dataset and then tuned to identify new diseases from few images, ranging from 5 to 50 images per disease. The proposed approaches were also evaluated in the case of identifying the disease and plant species together or only if the disease was identified, regardless of the affected plant. The evaluation results demonstrated that a baseline model trained with a large set of source field images can be adapted to classify new diseases from a small number of images. It can also take advantage of the availability of a larger number of images. In addition, by comparing it with metric learning methods, we found that baseline model has better transferability when the source domain images differ from the target domain images significantly or are captured in different conditions. It achieved an accuracy of [Formula: see text] when the shift from source domain to target domain was small and [Formula: see text] when that shift was large and outperformed all other competitive approaches.
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spelling pubmed-78234282021-01-24 Convolutional Neural Network for Automatic Identification of Plant Diseases with Limited Data Afifi, Ahmed Alhumam, Abdulaziz Abdelwahab, Amira Plants (Basel) Article Automated identification of plant diseases is very important for crop protection. Most automated approaches aim to build classification models based on leaf or fruit images. These approaches usually require the collection and annotation of many images, which is difficult and costly process especially in the case of new or rare diseases. Therefore, in this study, we developed and evaluated several methods for identifying plant diseases with little data. Convolutional Neural Networks (CNNs) are used due to their superior ability to transfer learning. Three CNN architectures (ResNet18, ResNet34, and ResNet50) were used to build two baseline models, a Triplet network and a deep adversarial Metric Learning (DAML) approach. These approaches were trained from a large source domain dataset and then tuned to identify new diseases from few images, ranging from 5 to 50 images per disease. The proposed approaches were also evaluated in the case of identifying the disease and plant species together or only if the disease was identified, regardless of the affected plant. The evaluation results demonstrated that a baseline model trained with a large set of source field images can be adapted to classify new diseases from a small number of images. It can also take advantage of the availability of a larger number of images. In addition, by comparing it with metric learning methods, we found that baseline model has better transferability when the source domain images differ from the target domain images significantly or are captured in different conditions. It achieved an accuracy of [Formula: see text] when the shift from source domain to target domain was small and [Formula: see text] when that shift was large and outperformed all other competitive approaches. MDPI 2020-12-24 /pmc/articles/PMC7823428/ /pubmed/33374398 http://dx.doi.org/10.3390/plants10010028 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Afifi, Ahmed
Alhumam, Abdulaziz
Abdelwahab, Amira
Convolutional Neural Network for Automatic Identification of Plant Diseases with Limited Data
title Convolutional Neural Network for Automatic Identification of Plant Diseases with Limited Data
title_full Convolutional Neural Network for Automatic Identification of Plant Diseases with Limited Data
title_fullStr Convolutional Neural Network for Automatic Identification of Plant Diseases with Limited Data
title_full_unstemmed Convolutional Neural Network for Automatic Identification of Plant Diseases with Limited Data
title_short Convolutional Neural Network for Automatic Identification of Plant Diseases with Limited Data
title_sort convolutional neural network for automatic identification of plant diseases with limited data
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7823428/
https://www.ncbi.nlm.nih.gov/pubmed/33374398
http://dx.doi.org/10.3390/plants10010028
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