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Development and Validation of an Automated Radiomic CT Signature for Detecting COVID-19

The coronavirus disease 2019 (COVID-19) outbreak has reached pandemic status. Drastic measures of social distancing are enforced in society and healthcare systems are being pushed to and beyond their limits. To help in the fight against this threat on human health, a fully automated AI framework was...

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Autores principales: Guiot, Julien, Vaidyanathan, Akshayaa, Deprez, Louis, Zerka, Fadila, Danthine, Denis, Frix, Anne-Noëlle, Thys, Marie, Henket, Monique, Canivet, Gregory, Mathieu, Stephane, Eftaxia, Evanthia, Lambin, Philippe, Tsoutzidis, Nathan, Miraglio, Benjamin, Walsh, Sean, Moutschen, Michel, Louis, Renaud, Meunier, Paul, Vos, Wim, Leijenaar, Ralph T. H., Lovinfosse, Pierre
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7823620/
https://www.ncbi.nlm.nih.gov/pubmed/33396587
http://dx.doi.org/10.3390/diagnostics11010041
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author Guiot, Julien
Vaidyanathan, Akshayaa
Deprez, Louis
Zerka, Fadila
Danthine, Denis
Frix, Anne-Noëlle
Thys, Marie
Henket, Monique
Canivet, Gregory
Mathieu, Stephane
Eftaxia, Evanthia
Lambin, Philippe
Tsoutzidis, Nathan
Miraglio, Benjamin
Walsh, Sean
Moutschen, Michel
Louis, Renaud
Meunier, Paul
Vos, Wim
Leijenaar, Ralph T. H.
Lovinfosse, Pierre
author_facet Guiot, Julien
Vaidyanathan, Akshayaa
Deprez, Louis
Zerka, Fadila
Danthine, Denis
Frix, Anne-Noëlle
Thys, Marie
Henket, Monique
Canivet, Gregory
Mathieu, Stephane
Eftaxia, Evanthia
Lambin, Philippe
Tsoutzidis, Nathan
Miraglio, Benjamin
Walsh, Sean
Moutschen, Michel
Louis, Renaud
Meunier, Paul
Vos, Wim
Leijenaar, Ralph T. H.
Lovinfosse, Pierre
author_sort Guiot, Julien
collection PubMed
description The coronavirus disease 2019 (COVID-19) outbreak has reached pandemic status. Drastic measures of social distancing are enforced in society and healthcare systems are being pushed to and beyond their limits. To help in the fight against this threat on human health, a fully automated AI framework was developed to extract radiomics features from volumetric chest computed tomography (CT) exams. The detection model was developed on a dataset of 1381 patients (181 COVID-19 patients plus 1200 non COVID control patients). A second, independent dataset of 197 RT-PCR confirmed COVID-19 patients and 500 control patients was used to assess the performance of the model. Diagnostic performance was assessed by the area under the receiver operating characteristic curve (AUC). The model had an AUC of 0.882 (95% CI: 0.851–0.913) in the independent test dataset (641 patients). The optimal decision threshold, considering the cost of false negatives twice as high as the cost of false positives, resulted in an accuracy of 85.18%, a sensitivity of 69.52%, a specificity of 91.63%, a negative predictive value (NPV) of 94.46% and a positive predictive value (PPV) of 59.44%. Benchmarked against RT-PCR confirmed cases of COVID-19, our AI framework can accurately differentiate COVID-19 from routine clinical conditions in a fully automated fashion. Thus, providing rapid accurate diagnosis in patients suspected of COVID-19 infection, facilitating the timely implementation of isolation procedures and early intervention.
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spelling pubmed-78236202021-01-24 Development and Validation of an Automated Radiomic CT Signature for Detecting COVID-19 Guiot, Julien Vaidyanathan, Akshayaa Deprez, Louis Zerka, Fadila Danthine, Denis Frix, Anne-Noëlle Thys, Marie Henket, Monique Canivet, Gregory Mathieu, Stephane Eftaxia, Evanthia Lambin, Philippe Tsoutzidis, Nathan Miraglio, Benjamin Walsh, Sean Moutschen, Michel Louis, Renaud Meunier, Paul Vos, Wim Leijenaar, Ralph T. H. Lovinfosse, Pierre Diagnostics (Basel) Article The coronavirus disease 2019 (COVID-19) outbreak has reached pandemic status. Drastic measures of social distancing are enforced in society and healthcare systems are being pushed to and beyond their limits. To help in the fight against this threat on human health, a fully automated AI framework was developed to extract radiomics features from volumetric chest computed tomography (CT) exams. The detection model was developed on a dataset of 1381 patients (181 COVID-19 patients plus 1200 non COVID control patients). A second, independent dataset of 197 RT-PCR confirmed COVID-19 patients and 500 control patients was used to assess the performance of the model. Diagnostic performance was assessed by the area under the receiver operating characteristic curve (AUC). The model had an AUC of 0.882 (95% CI: 0.851–0.913) in the independent test dataset (641 patients). The optimal decision threshold, considering the cost of false negatives twice as high as the cost of false positives, resulted in an accuracy of 85.18%, a sensitivity of 69.52%, a specificity of 91.63%, a negative predictive value (NPV) of 94.46% and a positive predictive value (PPV) of 59.44%. Benchmarked against RT-PCR confirmed cases of COVID-19, our AI framework can accurately differentiate COVID-19 from routine clinical conditions in a fully automated fashion. Thus, providing rapid accurate diagnosis in patients suspected of COVID-19 infection, facilitating the timely implementation of isolation procedures and early intervention. MDPI 2020-12-30 /pmc/articles/PMC7823620/ /pubmed/33396587 http://dx.doi.org/10.3390/diagnostics11010041 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Guiot, Julien
Vaidyanathan, Akshayaa
Deprez, Louis
Zerka, Fadila
Danthine, Denis
Frix, Anne-Noëlle
Thys, Marie
Henket, Monique
Canivet, Gregory
Mathieu, Stephane
Eftaxia, Evanthia
Lambin, Philippe
Tsoutzidis, Nathan
Miraglio, Benjamin
Walsh, Sean
Moutschen, Michel
Louis, Renaud
Meunier, Paul
Vos, Wim
Leijenaar, Ralph T. H.
Lovinfosse, Pierre
Development and Validation of an Automated Radiomic CT Signature for Detecting COVID-19
title Development and Validation of an Automated Radiomic CT Signature for Detecting COVID-19
title_full Development and Validation of an Automated Radiomic CT Signature for Detecting COVID-19
title_fullStr Development and Validation of an Automated Radiomic CT Signature for Detecting COVID-19
title_full_unstemmed Development and Validation of an Automated Radiomic CT Signature for Detecting COVID-19
title_short Development and Validation of an Automated Radiomic CT Signature for Detecting COVID-19
title_sort development and validation of an automated radiomic ct signature for detecting covid-19
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7823620/
https://www.ncbi.nlm.nih.gov/pubmed/33396587
http://dx.doi.org/10.3390/diagnostics11010041
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