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IMGT(®) Biocuration and Comparative Analysis of Bos taurus and Ovis aries TRA/TRD Loci

The adaptive immune response provides the vertebrate immune system with the ability to recognize and remember specific pathogens to generate immunity, and mount stronger attacks each time the pathogen is encountered. T cell receptors are the antigen receptors of the adaptive immune response expresse...

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Autores principales: Pégorier, Perrine, Bertignac, Morgane, Nguefack Ngoune, Viviane, Folch, Géraldine, Jabado-Michaloud, Joumana, Giudicelli, Véronique, Duroux, Patrice, Lefranc, Marie-Paule, Kossida, Sofia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7824213/
https://www.ncbi.nlm.nih.gov/pubmed/33379283
http://dx.doi.org/10.3390/genes12010030
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author Pégorier, Perrine
Bertignac, Morgane
Nguefack Ngoune, Viviane
Folch, Géraldine
Jabado-Michaloud, Joumana
Giudicelli, Véronique
Duroux, Patrice
Lefranc, Marie-Paule
Kossida, Sofia
author_facet Pégorier, Perrine
Bertignac, Morgane
Nguefack Ngoune, Viviane
Folch, Géraldine
Jabado-Michaloud, Joumana
Giudicelli, Véronique
Duroux, Patrice
Lefranc, Marie-Paule
Kossida, Sofia
author_sort Pégorier, Perrine
collection PubMed
description The adaptive immune response provides the vertebrate immune system with the ability to recognize and remember specific pathogens to generate immunity, and mount stronger attacks each time the pathogen is encountered. T cell receptors are the antigen receptors of the adaptive immune response expressed by T cells, which specifically recognize processed antigens, presented as peptides by the highly polymorphic major histocompatibility (MH) proteins. T cell receptors (TR) are divided into two groups, [Formula: see text] and [Formula: see text] , which express distinct TR containing either [Formula: see text] and [Formula: see text] , or [Formula: see text] and [Formula: see text] chains, respectively. The TR [Formula: see text] locus (TRA) and TR [Formula: see text] locus (TRD) of bovine (Bos taurus) and the sheep (Ovis aries) have recently been described and annotated by IMGT(®) biocurators. The aim of the present study is to present the results of the biocuration and to compare the genes of the TRA/TRD loci among these ruminant species based on the Homo sapiens repertoire. The comparative analysis shows similarities but also differences, including the fact that these two species have a TRA/TRD locus about three times larger than that of humans and therefore have many more genes which may demonstrate duplications and/or deletions during evolution.
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spelling pubmed-78242132021-01-24 IMGT(®) Biocuration and Comparative Analysis of Bos taurus and Ovis aries TRA/TRD Loci Pégorier, Perrine Bertignac, Morgane Nguefack Ngoune, Viviane Folch, Géraldine Jabado-Michaloud, Joumana Giudicelli, Véronique Duroux, Patrice Lefranc, Marie-Paule Kossida, Sofia Genes (Basel) Article The adaptive immune response provides the vertebrate immune system with the ability to recognize and remember specific pathogens to generate immunity, and mount stronger attacks each time the pathogen is encountered. T cell receptors are the antigen receptors of the adaptive immune response expressed by T cells, which specifically recognize processed antigens, presented as peptides by the highly polymorphic major histocompatibility (MH) proteins. T cell receptors (TR) are divided into two groups, [Formula: see text] and [Formula: see text] , which express distinct TR containing either [Formula: see text] and [Formula: see text] , or [Formula: see text] and [Formula: see text] chains, respectively. The TR [Formula: see text] locus (TRA) and TR [Formula: see text] locus (TRD) of bovine (Bos taurus) and the sheep (Ovis aries) have recently been described and annotated by IMGT(®) biocurators. The aim of the present study is to present the results of the biocuration and to compare the genes of the TRA/TRD loci among these ruminant species based on the Homo sapiens repertoire. The comparative analysis shows similarities but also differences, including the fact that these two species have a TRA/TRD locus about three times larger than that of humans and therefore have many more genes which may demonstrate duplications and/or deletions during evolution. MDPI 2020-12-28 /pmc/articles/PMC7824213/ /pubmed/33379283 http://dx.doi.org/10.3390/genes12010030 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Pégorier, Perrine
Bertignac, Morgane
Nguefack Ngoune, Viviane
Folch, Géraldine
Jabado-Michaloud, Joumana
Giudicelli, Véronique
Duroux, Patrice
Lefranc, Marie-Paule
Kossida, Sofia
IMGT(®) Biocuration and Comparative Analysis of Bos taurus and Ovis aries TRA/TRD Loci
title IMGT(®) Biocuration and Comparative Analysis of Bos taurus and Ovis aries TRA/TRD Loci
title_full IMGT(®) Biocuration and Comparative Analysis of Bos taurus and Ovis aries TRA/TRD Loci
title_fullStr IMGT(®) Biocuration and Comparative Analysis of Bos taurus and Ovis aries TRA/TRD Loci
title_full_unstemmed IMGT(®) Biocuration and Comparative Analysis of Bos taurus and Ovis aries TRA/TRD Loci
title_short IMGT(®) Biocuration and Comparative Analysis of Bos taurus and Ovis aries TRA/TRD Loci
title_sort imgt(®) biocuration and comparative analysis of bos taurus and ovis aries tra/trd loci
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7824213/
https://www.ncbi.nlm.nih.gov/pubmed/33379283
http://dx.doi.org/10.3390/genes12010030
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