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Identification of a Circulating miRNA Signature to Stratify Acute Respiratory Distress Syndrome Patients

There is a need to improve acute respiratory distress syndrome (ARDS) diagnosis and management, particularly with extracorporeal membrane oxygenation (ECMO), and different biomarkers have been tested to implement a precision-focused approach. We included ARDS patients on veno-venous (V-V) ECMO in a...

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Autores principales: Martucci, Gennaro, Arcadipane, Antonio, Tuzzolino, Fabio, Occhipinti, Giovanna, Panarello, Giovanna, Carcione, Claudia, Bonicolini, Eleonora, Vitiello, Chiara, Lorusso, Roberto, Conaldi, Pier Giulio, Miceli, Vitale
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7824233/
https://www.ncbi.nlm.nih.gov/pubmed/33375484
http://dx.doi.org/10.3390/jpm11010015
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author Martucci, Gennaro
Arcadipane, Antonio
Tuzzolino, Fabio
Occhipinti, Giovanna
Panarello, Giovanna
Carcione, Claudia
Bonicolini, Eleonora
Vitiello, Chiara
Lorusso, Roberto
Conaldi, Pier Giulio
Miceli, Vitale
author_facet Martucci, Gennaro
Arcadipane, Antonio
Tuzzolino, Fabio
Occhipinti, Giovanna
Panarello, Giovanna
Carcione, Claudia
Bonicolini, Eleonora
Vitiello, Chiara
Lorusso, Roberto
Conaldi, Pier Giulio
Miceli, Vitale
author_sort Martucci, Gennaro
collection PubMed
description There is a need to improve acute respiratory distress syndrome (ARDS) diagnosis and management, particularly with extracorporeal membrane oxygenation (ECMO), and different biomarkers have been tested to implement a precision-focused approach. We included ARDS patients on veno-venous (V-V) ECMO in a prospective observational pilot study. Blood samples were obtained before cannulation, and screened for the expression of 754 circulating microRNA (miRNAs) using high-throughput qPCR and hierarchical cluster analysis. The miRNet database was used to predict target genes of deregulated miRNAs, and the DIANA tool was used to identify significant enrichment pathways. A hierarchical cluster of 229 miRNAs (identified after quality control screening) produced a clear separation of 11 patients into two groups: considering the baseline SAPS II, SOFA, and RESP score cluster A (n = 6) showed higher severity compared to cluster B (n = 5); p values < 0.05. After analysis of differentially expressed miRNAs between the two clusters, 95 deregulated miRNAs were identified, and reduced to 13 by in silico analysis. These miRNAs target genes implicated in tissue remodeling, immune system, and blood coagulation pathways. The blood levels of 13 miRNAs are altered in severe ARDS. Further investigations will have to match miRNA results with inflammatory biomarkers and clinical data.
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spelling pubmed-78242332021-01-24 Identification of a Circulating miRNA Signature to Stratify Acute Respiratory Distress Syndrome Patients Martucci, Gennaro Arcadipane, Antonio Tuzzolino, Fabio Occhipinti, Giovanna Panarello, Giovanna Carcione, Claudia Bonicolini, Eleonora Vitiello, Chiara Lorusso, Roberto Conaldi, Pier Giulio Miceli, Vitale J Pers Med Article There is a need to improve acute respiratory distress syndrome (ARDS) diagnosis and management, particularly with extracorporeal membrane oxygenation (ECMO), and different biomarkers have been tested to implement a precision-focused approach. We included ARDS patients on veno-venous (V-V) ECMO in a prospective observational pilot study. Blood samples were obtained before cannulation, and screened for the expression of 754 circulating microRNA (miRNAs) using high-throughput qPCR and hierarchical cluster analysis. The miRNet database was used to predict target genes of deregulated miRNAs, and the DIANA tool was used to identify significant enrichment pathways. A hierarchical cluster of 229 miRNAs (identified after quality control screening) produced a clear separation of 11 patients into two groups: considering the baseline SAPS II, SOFA, and RESP score cluster A (n = 6) showed higher severity compared to cluster B (n = 5); p values < 0.05. After analysis of differentially expressed miRNAs between the two clusters, 95 deregulated miRNAs were identified, and reduced to 13 by in silico analysis. These miRNAs target genes implicated in tissue remodeling, immune system, and blood coagulation pathways. The blood levels of 13 miRNAs are altered in severe ARDS. Further investigations will have to match miRNA results with inflammatory biomarkers and clinical data. MDPI 2020-12-27 /pmc/articles/PMC7824233/ /pubmed/33375484 http://dx.doi.org/10.3390/jpm11010015 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Martucci, Gennaro
Arcadipane, Antonio
Tuzzolino, Fabio
Occhipinti, Giovanna
Panarello, Giovanna
Carcione, Claudia
Bonicolini, Eleonora
Vitiello, Chiara
Lorusso, Roberto
Conaldi, Pier Giulio
Miceli, Vitale
Identification of a Circulating miRNA Signature to Stratify Acute Respiratory Distress Syndrome Patients
title Identification of a Circulating miRNA Signature to Stratify Acute Respiratory Distress Syndrome Patients
title_full Identification of a Circulating miRNA Signature to Stratify Acute Respiratory Distress Syndrome Patients
title_fullStr Identification of a Circulating miRNA Signature to Stratify Acute Respiratory Distress Syndrome Patients
title_full_unstemmed Identification of a Circulating miRNA Signature to Stratify Acute Respiratory Distress Syndrome Patients
title_short Identification of a Circulating miRNA Signature to Stratify Acute Respiratory Distress Syndrome Patients
title_sort identification of a circulating mirna signature to stratify acute respiratory distress syndrome patients
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7824233/
https://www.ncbi.nlm.nih.gov/pubmed/33375484
http://dx.doi.org/10.3390/jpm11010015
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