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Identification of a Circulating miRNA Signature to Stratify Acute Respiratory Distress Syndrome Patients
There is a need to improve acute respiratory distress syndrome (ARDS) diagnosis and management, particularly with extracorporeal membrane oxygenation (ECMO), and different biomarkers have been tested to implement a precision-focused approach. We included ARDS patients on veno-venous (V-V) ECMO in a...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7824233/ https://www.ncbi.nlm.nih.gov/pubmed/33375484 http://dx.doi.org/10.3390/jpm11010015 |
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author | Martucci, Gennaro Arcadipane, Antonio Tuzzolino, Fabio Occhipinti, Giovanna Panarello, Giovanna Carcione, Claudia Bonicolini, Eleonora Vitiello, Chiara Lorusso, Roberto Conaldi, Pier Giulio Miceli, Vitale |
author_facet | Martucci, Gennaro Arcadipane, Antonio Tuzzolino, Fabio Occhipinti, Giovanna Panarello, Giovanna Carcione, Claudia Bonicolini, Eleonora Vitiello, Chiara Lorusso, Roberto Conaldi, Pier Giulio Miceli, Vitale |
author_sort | Martucci, Gennaro |
collection | PubMed |
description | There is a need to improve acute respiratory distress syndrome (ARDS) diagnosis and management, particularly with extracorporeal membrane oxygenation (ECMO), and different biomarkers have been tested to implement a precision-focused approach. We included ARDS patients on veno-venous (V-V) ECMO in a prospective observational pilot study. Blood samples were obtained before cannulation, and screened for the expression of 754 circulating microRNA (miRNAs) using high-throughput qPCR and hierarchical cluster analysis. The miRNet database was used to predict target genes of deregulated miRNAs, and the DIANA tool was used to identify significant enrichment pathways. A hierarchical cluster of 229 miRNAs (identified after quality control screening) produced a clear separation of 11 patients into two groups: considering the baseline SAPS II, SOFA, and RESP score cluster A (n = 6) showed higher severity compared to cluster B (n = 5); p values < 0.05. After analysis of differentially expressed miRNAs between the two clusters, 95 deregulated miRNAs were identified, and reduced to 13 by in silico analysis. These miRNAs target genes implicated in tissue remodeling, immune system, and blood coagulation pathways. The blood levels of 13 miRNAs are altered in severe ARDS. Further investigations will have to match miRNA results with inflammatory biomarkers and clinical data. |
format | Online Article Text |
id | pubmed-7824233 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-78242332021-01-24 Identification of a Circulating miRNA Signature to Stratify Acute Respiratory Distress Syndrome Patients Martucci, Gennaro Arcadipane, Antonio Tuzzolino, Fabio Occhipinti, Giovanna Panarello, Giovanna Carcione, Claudia Bonicolini, Eleonora Vitiello, Chiara Lorusso, Roberto Conaldi, Pier Giulio Miceli, Vitale J Pers Med Article There is a need to improve acute respiratory distress syndrome (ARDS) diagnosis and management, particularly with extracorporeal membrane oxygenation (ECMO), and different biomarkers have been tested to implement a precision-focused approach. We included ARDS patients on veno-venous (V-V) ECMO in a prospective observational pilot study. Blood samples were obtained before cannulation, and screened for the expression of 754 circulating microRNA (miRNAs) using high-throughput qPCR and hierarchical cluster analysis. The miRNet database was used to predict target genes of deregulated miRNAs, and the DIANA tool was used to identify significant enrichment pathways. A hierarchical cluster of 229 miRNAs (identified after quality control screening) produced a clear separation of 11 patients into two groups: considering the baseline SAPS II, SOFA, and RESP score cluster A (n = 6) showed higher severity compared to cluster B (n = 5); p values < 0.05. After analysis of differentially expressed miRNAs between the two clusters, 95 deregulated miRNAs were identified, and reduced to 13 by in silico analysis. These miRNAs target genes implicated in tissue remodeling, immune system, and blood coagulation pathways. The blood levels of 13 miRNAs are altered in severe ARDS. Further investigations will have to match miRNA results with inflammatory biomarkers and clinical data. MDPI 2020-12-27 /pmc/articles/PMC7824233/ /pubmed/33375484 http://dx.doi.org/10.3390/jpm11010015 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Martucci, Gennaro Arcadipane, Antonio Tuzzolino, Fabio Occhipinti, Giovanna Panarello, Giovanna Carcione, Claudia Bonicolini, Eleonora Vitiello, Chiara Lorusso, Roberto Conaldi, Pier Giulio Miceli, Vitale Identification of a Circulating miRNA Signature to Stratify Acute Respiratory Distress Syndrome Patients |
title | Identification of a Circulating miRNA Signature to Stratify Acute Respiratory Distress Syndrome Patients |
title_full | Identification of a Circulating miRNA Signature to Stratify Acute Respiratory Distress Syndrome Patients |
title_fullStr | Identification of a Circulating miRNA Signature to Stratify Acute Respiratory Distress Syndrome Patients |
title_full_unstemmed | Identification of a Circulating miRNA Signature to Stratify Acute Respiratory Distress Syndrome Patients |
title_short | Identification of a Circulating miRNA Signature to Stratify Acute Respiratory Distress Syndrome Patients |
title_sort | identification of a circulating mirna signature to stratify acute respiratory distress syndrome patients |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7824233/ https://www.ncbi.nlm.nih.gov/pubmed/33375484 http://dx.doi.org/10.3390/jpm11010015 |
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