Cargando…

Population Structure Assessed Using Microsatellite and SNP Data: An Empirical Comparison in West African Cattle

SIMPLE SUMMARY: Projection of genetic variability on geographic maps is a useful strategy to ascertain population structure and gene flow events when previous genetic information on the scenarios analyzed is not high. Here, we compared the performance of microsatellite sets and Single Nucleotide Pol...

Descripción completa

Detalles Bibliográficos
Autores principales:	Álvarez, Isabel, Fernández, Iván, Traoré, Amadou, Menéndez-Arias, Nuria A., Goyache, Félix
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2021
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7827059/ https://www.ncbi.nlm.nih.gov/pubmed/33440799 http://dx.doi.org/10.3390/ani11010151

Ejemplares similares

Identification and Characterization of Copy Number Variations Regions in West African Taurine Cattle
por: Goyache, Félix, et al.
Publicado: (2022)

Ancient Homozygosity Segments in West African Djallonké Sheep Inform on the Genomic Impact of Livestock Adaptation to the Environment
por: Álvarez, Isabel, et al.
Publicado: (2020)

Genomic scan of selective sweeps in Djallonké (West African Dwarf) sheep shed light on adaptation to harsh environments
por: Álvarez, Isabel, et al.
Publicado: (2020)

Assessing performance of single‐sample molecular genetic methods to estimate effective population size: empirical evidence from the endangered Gochu Asturcelta pig breed
por: Menéndez, Juan, et al.
Publicado: (2016)

Understanding Mendelian errors in SNP arrays data using a Gochu Asturcelta pig pedigree: genomic alterations, family size and calling errors
por: Arias, Katherine D., et al.
Publicado: (2022)

Identification of genomic regions and candidate genes of functional importance for gastrointestinal parasite resistance traits in Djallonké sheep of Burkina Faso
por: Álvarez, Isabel, et al.
Publicado: (2019)

Estimating genomic diversity and population differentiation – an empirical comparison of microsatellite and SNP variation in Arabidopsis halleri
por: Fischer, Martin C., et al.
Publicado: (2017)

Inference of Breed Structure in Farm Animals: Empirical Comparison between SNP and Microsatellite Performance
por: Laoun, Abbas, et al.
Publicado: (2020)

An empirical comparison of population genetic analyses using microsatellite and SNP data for a species of conservation concern
por: Zimmerman, Shawna J., et al.
Publicado: (2020)

Ascertaining gene flow patterns in livestock populations of developing countries: a case study in Burkina Faso goat
por: Traoré, Amadou, et al.
Publicado: (2012)

Approaching autozygosity in a small pedigree of Gochu Asturcelta pigs
por: Arias, Katherine D., et al.
Publicado: (2023)

Copy Number Variation Regions Differing in Segregation Patterns Span Different Sets of Genes
por: Arias, Katherine D., et al.
Publicado: (2023)

Legacies of domestication, trade and herder mobility shape extant male zebu cattle diversity in South Asia and Africa
por: Pérez-Pardal, Lucía, et al.
Publicado: (2018)

Insight into the genetic composition of South African Sanga cattle using SNP data from cattle breeds worldwide
por: Makina, Sithembile O., et al.
Publicado: (2016)

Assessment of microsatellite and SNP markers for parentage assignment in ex situ African Penguin (Spheniscus demersus) populations
por: Labuschagne, Christiaan, et al.
Publicado: (2015)

Study of Genetic Diversity among Simmental Cross Cattle in West Sumatra Based on Microsatellite Markers
por: Agung, Paskah Partogi, et al.
Publicado: (2016)

Comparison of the effectiveness of microsatellites and SNP panels for genetic identification, traceability and assessment of parentage in an inbred Angus herd
por: Fernández, María E., et al.
Publicado: (2013)

SNP panels for the estimation of dairy breed proportion and parentage assignment in African crossbred dairy cattle
por: Gebrehiwot, Netsanet Z., et al.
Publicado: (2021)

SNPSTR: a database of compound microsatellite-SNP markers
por: Agrafioti, I., et al.
Publicado: (2007)

Genetic diversity, introgression and relationships among West/Central African cattle breeds
por: Ibeagha-Awemu, Eveline Mengwi, et al.
Publicado: (2004)

Inference of Ancestries and Heterozygosity Proportion and Genotype Imputation in West African Cattle Populations
por: Gebrehiwot, Netsanet Z., et al.
Publicado: (2021)

The patterns of admixture, divergence, and ancestry of African cattle populations determined from genome-wide SNP data
por: Gebrehiwot, N. Z., et al.
Publicado: (2020)

Herdbook analyses of the Asturiana beef cattle breeds
por: Cañón, J, et al.
Publicado: (1994)

Biological and phylogenetic characteristics of West African lineages of West Nile virus
por: Fall, Gamou, et al.
Publicado: (2017)

Genetic Map of Triticale Integrating Microsatellite, DArT and SNP Markers
por: Tyrka, Mirosław, et al.
Publicado: (2015)

Use of Microsatellite and SNP Markers for Biotype Characterization in Hessian Fly
por: Schemerhorn, Brandon J., et al.
Publicado: (2015)

Comparison of SNP Variation and Distribution in Indigenous Ethiopian and Korean Cattle (Hanwoo) Populations
por: Edea, Zewdu, et al.
Publicado: (2012)

Human Adaptation of Ebola Virus during the West African Outbreak
por: Urbanowicz, Richard A., et al.
Publicado: (2016)

A whole genome Bayesian scan for adaptive genetic divergence in West African cattle
por: Gautier, Mathieu, et al.
Publicado: (2009)

A Comparison of Phenotypic Traits Related to Trypanotolerance in Five West African Cattle Breeds Highlights the Value of Shorthorn Taurine Breeds
por: Berthier, David, et al.
Publicado: (2015)

A First Generation Microsatellite- and SNP-Based Linkage Map of Jatropha
por: Wang, Chun Ming, et al.
Publicado: (2011)

Imputation of Microsatellite Alleles from Dense SNP Genotypes for Parental Verification
por: McClure, Matthew, et al.
Publicado: (2012)

Comparative Analysis of Microsatellite and SNP Markers for Genetic Management of Red Deer
por: Pérez-González, Javier, et al.
Publicado: (2023)

Sex and site differences in urinary excretion of conjugated pyrene metabolites in the West African Shorthorn cattle
por: BORTEY-SAM, Nesta, et al.
Publicado: (2017)

Genome Sequence Analysis Reveals Selection Signatures in Endangered Trypanotolerant West African Muturu Cattle
por: Tijjani, Abdulfatai, et al.
Publicado: (2019)

Unraveling Admixture, Inbreeding, and Recent Selection Signatures in West African Indigenous Cattle Populations in Benin
por: Vanvanhossou, Sèyi Fridaïus Ulrich, et al.
Publicado: (2021)

Isolation and characterization of 11 novel microsatellite loci in a West African leaf-nosed bat, Hipposideros aff. ruber
por: Baldwin, Heather J, et al.
Publicado: (2014)

Polymorphisms of two Y chromosome microsatellites in Chinese cattle
por: Cai, Xin, et al.
Publicado: (2006)

SNP Genotyping Identifies New Signatures of Selection in a Deep Sample of West African Plasmodium falciparum Malaria Parasites
por: Amambua-Ngwa, Alfred, et al.
Publicado: (2012)

Investigation into the Ability of SNP Chipsets and Microsatellites to Detect Association with a Disease Locus
por: Curtis, D, et al.
Publicado: (2008)

Cannot write session to /tmp/vufind_sessions/sess_01djq6dqqbtolp8o5ekpg2im66